| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0524 |
|---|
| Symbol | |
|---|
| ID | 4436784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 471406 |
|---|
| End bp | 472602 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639676241 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_819998 |
|---|
| Protein GI | 116627379 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00168014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AAAAATACGA TCGTAGTAAA CCACACGTTA ACATTGGTAC AATCGGACAC
GTTGACCACG GTAAAACTAC TTTGACAGCT GCAATCACAA CTGTATTGGC TCGTCGTCTT
CCTAGCGCAG TTAACACACC AAAAGACTAC GCTTCAATCG ACGCTGCTCC AGAAGAACGT
GAACGCGGTA TCACAATCAA CACTGCACAC GTTGAATATG AAACTGAAAA ACGTCACTAC
GCTCACATCG ATGCGCCAGG ACACGCGGAC TACGTTAAAA ACATGATCAC TGGTGCCGCT
CAAATGGACG GTGCGATCCT TGTAGTTGCA TCTACTGACG GACCAATGCC ACAAACTCGT
GAGCACATCC TTCTTTCACG TCAGGTTGGT GTTAAACACC TTATCGTCTT CATGAACAAA
GTTGACTTGG TTGACGATGA AGAATTGCTT GAATTAGTTG AAATGGAAAT CCGTGACCTT
CTTTCAGAAT ACGATTTCCC AGGTGATGAC ATTCCAGTTA TCCAAGGTTC AGCTCTTAAA
GCTCTTGAAG GTGATTCTAA ATATGAAGAC ATCATCATGG ACTTGATGAA TACTGTTGAC
GAATACATTC CAGAACCAGA ACGCGACACT GACAAACCAT TGTTGCTTCC AGTCGAAGAT
GTATTCTCAA TCACTGGTCG TGGTACTGTT GCATCAGGAC GTATTGACCG TGGTGTTGTT
CGTGTTAATG ACGAAGTTGA AATTGTTGGT CTTAAAGAAG AAAGCCAAAA AGCAGTTGTT
ACTGGTGTAG AAATGTTCCG TAAACAACTT GATGAAGGTA TTGCCGGTGA TAACGTCGGT
GTCCTTCTTC GTGGTATCCA ACGTGATGAA ATCGAACGTG GTCAAGTATT GGCTGCGCCT
GGTTCAATCA AGCCACACAC TAAATTCAAA GGTGAAGTTT ACATCCTTAC TAAAGAAGAA
GGTGGACGTC ACACTCCATT CTTCAATAAC TACCGTCCAC AGTTCTACTT CCGTACAACT
GACGTAACAG GTTCAATCGA ACTTCCTGCA GGTACTGAAA TGGTTATGCC TGGTGATAAC
GTGACTATCG ACGTTGAGTT GATCCACCCA ATTGCCGTTG AAAAAGGTAC AACATTCTCT
ATCCGTGAAG GTGGACGTAC TGTTGGTTCA GGTATCGTAA CTGAAATCGA AGCTTAA
|
|---|
| Protein sequence | MAKEKYDRSK PHVNIGTIGH VDHGKTTLTA AITTVLARRL PSAVNTPKDY ASIDAAPEER
ERGITINTAH VEYETEKRHY AHIDAPGHAD YVKNMITGAA QMDGAILVVA STDGPMPQTR
EHILLSRQVG VKHLIVFMNK VDLVDDEELL ELVEMEIRDL LSEYDFPGDD IPVIQGSALK
ALEGDSKYED IIMDLMNTVD EYIPEPERDT DKPLLLPVED VFSITGRGTV ASGRIDRGVV
RVNDEVEIVG LKEESQKAVV TGVEMFRKQL DEGIAGDNVG VLLRGIQRDE IERGQVLAAP
GSIKPHTKFK GEVYILTKEE GGRHTPFFNN YRPQFYFRTT DVTGSIELPA GTEMVMPGDN
VTIDVELIHP IAVEKGTTFS IREGGRTVGS GIVTEIEA
|
|---|
| |