Gene STER_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0402 
Symbol 
ID4436722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp353079 
End bp353789 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID639676130 
ProductABC-type branched-chain amino acid transport system, ATPase component 
Protein accessionYP_819897 
Protein GI116627278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATGT TAAAAGTTGA AAATCTCTCA ATTAAATATG GATCTATCGA AGCTGTTAAA 
AACGTTAGTT TTGAAGTTAA TGAAGGTGAA GTTGTAACTC TTATCGGAGC CAATGGAGCA
GGTAAAACAT CTATTCTTCG TACAATCTCG GGTCTTATTC GTCCGACTGA AGGAACGATT
TCTTACCTTG GAAATGAAAT TCACAAAATA CCTGCTCGAA AGATTGTTGC AGAAGGTTTG
GCTCAAGTGC CTGAAGGACG TCACGTCTTT GCAGGATTAA CTGTAATGGA AAATCTTGAA
ATGGGCGCTT TCCTTCATAC AAATAAAGAA GAAAATGCAG CTCTATTGAA AAAAGTCTTC
CAACGTTTCC CACGTCTAGA AGAACGTAAG AATCAAGACG CTGCAACACT TTCTGGTGGT
GAGCAACAGA TGCTAGCGAT GGGTCGTGCC CTCATGAGTC GTCCGAAACT TTTGCTTTTG
GATGAACCTT CAATGGGGCT TGCTCCAATC TTTATTCAAG AAATCTTTGA TATTATTGAA
GACATCAAGG CGCAAGGAAC TACAGTTCTT TTGATTGAAC AAAATGCCAA TAAGGCATTA
TCAATTGCGG ATCGTGGTTA CGTTCTTGAA ACTGGAAAAG TGGTTCTTTC AGGTACTGGT
AAAGAACTTC TTGCATCAGA CGAAGTTCGT AAAGCCTATC TTGGAGGATA A
 
Protein sequence
MAMLKVENLS IKYGSIEAVK NVSFEVNEGE VVTLIGANGA GKTSILRTIS GLIRPTEGTI 
SYLGNEIHKI PARKIVAEGL AQVPEGRHVF AGLTVMENLE MGAFLHTNKE ENAALLKKVF
QRFPRLEERK NQDAATLSGG EQQMLAMGRA LMSRPKLLLL DEPSMGLAPI FIQEIFDIIE
DIKAQGTTVL LIEQNANKAL SIADRGYVLE TGKVVLSGTG KELLASDEVR KAYLGG