Gene STER_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0398 
Symbol 
ID4436718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp349255 
End bp350430 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content38% 
IMG OID639676126 
ProductABC-type branched-chain amino acid transport system, periplasmic component 
Protein accessionYP_819893 
Protein GI116627274 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000849541 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AGATCACACT TATTGTGCTA GCCTTTTTTG CCTCCATTTT TTTGGTTGCC 
TGTGGCAAGT CACCTGATGT GACTGCTAAT GCCAAAGGTA CTAAGATTGG GGATACAATC
AAAATTGGTG TTAACATGGA GTTGACAGGT GCTGTTGCGG CCTATGGTAA GTCTGAGCAG
AATGGTATTA AGTTGGCTGT TGATGAAATT AACAAAGCAG GTGGCGTTGA CGGCAAAAAG
ATAGAGCTCG TCACAAAAGA TAATAAATCT GAAAATGCTG AGGCTTCAAC ATCTTCAACG
AACTTGGCTA TTCAGAGTAA TGTAAATGCT ATCGTTGGTC CATCGACATC AGGAGCCGTT
GCTGCTGCTA GCCTCGTGTC ACAAAAAACA GGGGTTCCTT TGATAACACC TTCTGGTACA
CAGGATGACC TTACGGTAGA TGCTAATGGA GTTAAGAAAT TTGTTTTTCG TACAACCTTT
AAAGATAGCT ACCAAGGTGA AGTTTTGGCG GCTTATTCTT ACAATAATTT GAATGCTAAG
AAAGTAGTTC TCTACTATGA TAATGCTTCG GATTATGCCA AGGGAATTGC GGATGAATTC
AAGCGTAAAT ATAAAGGTCA AATCGTTACT GAAGCTACCT TTACTTCAGG TGACAAGGAC
TATCAGTCAG CTTTGACTAA ATTTAAAGAC CAAGATTATG ATGCGGTTGT AATGCCTGGT
TACTATACTG AGACTGGTAT TATTACAAAA CAAGCACGTG ACCTTGGAAT TGATAAACCA
ATTTTAGGAC CTGACGGATT CAGTGATGAG AAATTTACTG AGCTTGCAGG TAAAAAGAAT
GCTTCAAATG TCTACTATGT ATCAGGATAT TCAACAAATG TTGCTCTTTC TGACAAGGCA
TCTGGTTTCA TTAAAGCATA TGAGAAAGCT TACAAAATTG AACCAAATAT GTTTGCGGCT
CTAGCCTACG ATTCTGTTTA TATGGTTGCA GAAGCATCGA AAGGTGCAAA AACATCAGTA
GATATTGCTG ATAACTTAGC AAATCTGAAA AACTTTGTTG GGGTTACTGG TAAAATGACA
ATTGACAAGG ATCATAACCC TATTAAAGCA GCTCTTATGG TTAAAAGAGA TAATGGTGAA
GAGGTTTCAG CGGAAGCCGT TGAAATTGAA AAATAA
 
Protein sequence
MYKKITLIVL AFFASIFLVA CGKSPDVTAN AKGTKIGDTI KIGVNMELTG AVAAYGKSEQ 
NGIKLAVDEI NKAGGVDGKK IELVTKDNKS ENAEASTSST NLAIQSNVNA IVGPSTSGAV
AAASLVSQKT GVPLITPSGT QDDLTVDANG VKKFVFRTTF KDSYQGEVLA AYSYNNLNAK
KVVLYYDNAS DYAKGIADEF KRKYKGQIVT EATFTSGDKD YQSALTKFKD QDYDAVVMPG
YYTETGIITK QARDLGIDKP ILGPDGFSDE KFTELAGKKN ASNVYYVSGY STNVALSDKA
SGFIKAYEKA YKIEPNMFAA LAYDSVYMVA EASKGAKTSV DIADNLANLK NFVGVTGKMT
IDKDHNPIKA ALMVKRDNGE EVSAEAVEIE K