Gene STER_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0388 
Symbol 
ID4437945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp341404 
End bp343035 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content41% 
IMG OID639676117 
Productpolysaccharide transporter 
Protein accessionYP_819884 
Protein GI116627265 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.379787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA CTAAAACTGA CACGCAGCAG CAGCAAATGC TAAGAGGGAC GGCATGGATG 
ACAGCATCCA ATATTATCAG TCGTCTCTTA GGGGCACTCT ATATTATTCC TTGGTATGCT
TGGATGGGCA AACAGGGTGA CCAAGCCAAT GCTCTCTTTG GTCAGGGATA TAATATTTAT
GCCCTTTTCC TTTTGATTTC GACAGCAGGG ATTCCAGTCG CCATTGCCAA GCAGGTATCA
AAATATAACA CACTTGGAAA GATGGAAACG AGTTTCTTCT TACTCAAACG TATCTTGTAT
TATATGATTG GGCTTGGACT AATTTTTGGT GTTTTCATGT ATTTTGCTTC TCCGTGGATG
TCATATCTTT CTGGGGGAGA CGAAGACCTG GTTCGAGTAA TGCGCAGCCT TTCTTGGGCG
GTTGTCATTT TTCCATCGAT GTCTGTTTTA CGAGGCTTTT TCCAGGGCTT TAACAACATG
AAGCCTTATG CCCTAAGTCA GATTGCGGAG CAGATTATCC GTGTCATTTG GATGCTGTTG
GCGACTTTCT TCATCATGAA AATTGGTACA GGTGACTATG TGACTGCAGT TGTCCAATCG
ACTTTTGCTG CTTTCATCGG TATGTTGGCT AGTTATGGGG TACTTTTCTT CTATCTTTGG
AAAGAAGGCA AGCTCAAGAG CCTTTTTGGT AAGCAGGCCG TTCATCCTGA TATCAATCCA
ACTGCAATTG TTATTGAGAC ATTTAAGGAA GCCATTCCCT TCATTATTAC TGGATCAGCG
GTTCAACTTT TCCAGTTGAT TGATCAATGG ACTTTTATCC GTACTATGGA GAGGTTTACA
AGCTATAGTA ATAGTCAGCT TCAGGTTCTC TATGCTTATT TGTCTTCAAA CCCAAGTAAG
ATTACTATGA TTTTGATTGC CGTTGCTATT TCTATTGCTG GGGTCGGCAT CCCACTTCTG
ACAGAAAATA TGGTTAAAAA GGACCTTGGG GGAGCAGCCA AACTCATTAT TAATAATCTC
CAGTTACTTT TGCTCTTTAT TATACCAGCC ATTGCGGGTT CTGTGATTTT GGCCAAGCCA
TTATACACTG TCTTTTATGG AGCACCAGAC AGTCAGGCTC TTTTACTCTT CGTAGCTAGT
TTGATTCAAG TGATTTTCTT AGCTTTGTAT AGTGTTTTAG CACCAATGCT TCAGGCTATC
TTTGAGACCC GTAAAGCTAT CAATTATTTT GCGATTGGGG TGCTGATTAA GGCCATTCTA
CAGCTACCGT TGATTATTTT TTTAGGAGCC CTCGGTCCGG TTATTTCAAC AGCCATTGGG
TTAGGAGTTC CTATTGCTTT GATGTATAAT CGCCTTCACA CAGTTACTCA CTTTAGTCGT
AAGATAGTCT TTAGAAAAGC TCTACTCATT TGTATTATTA CAATGCTCAT GGTTATTCCA
GTTGCTGTTT TCTATTGGTT ATTCCAATTT GTCCTATCTC CAACAAGTCG TATGGGTAGT
GTGATTTACT TAGTGATTGG AGGAGGTCTT GGCGTTTTGG TCTATGGAGT GCTTGCTCTT
GTGACACATA TGGCTGATCA ATTGCTTGGC GCACGAGCAG GTAGATTACG AGCTAAATTA
CATATTAAAT AG
 
Protein sequence
MTETKTDTQQ QQMLRGTAWM TASNIISRLL GALYIIPWYA WMGKQGDQAN ALFGQGYNIY 
ALFLLISTAG IPVAIAKQVS KYNTLGKMET SFFLLKRILY YMIGLGLIFG VFMYFASPWM
SYLSGGDEDL VRVMRSLSWA VVIFPSMSVL RGFFQGFNNM KPYALSQIAE QIIRVIWMLL
ATFFIMKIGT GDYVTAVVQS TFAAFIGMLA SYGVLFFYLW KEGKLKSLFG KQAVHPDINP
TAIVIETFKE AIPFIITGSA VQLFQLIDQW TFIRTMERFT SYSNSQLQVL YAYLSSNPSK
ITMILIAVAI SIAGVGIPLL TENMVKKDLG GAAKLIINNL QLLLLFIIPA IAGSVILAKP
LYTVFYGAPD SQALLLFVAS LIQVIFLALY SVLAPMLQAI FETRKAINYF AIGVLIKAIL
QLPLIIFLGA LGPVISTAIG LGVPIALMYN RLHTVTHFSR KIVFRKALLI CIITMLMVIP
VAVFYWLFQF VLSPTSRMGS VIYLVIGGGL GVLVYGVLAL VTHMADQLLG ARAGRLRAKL
HIK