Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0388 |
Symbol | |
ID | 4437945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 341404 |
End bp | 343035 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639676117 |
Product | polysaccharide transporter |
Protein accession | YP_819884 |
Protein GI | 116627265 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.379787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAA CTAAAACTGA CACGCAGCAG CAGCAAATGC TAAGAGGGAC GGCATGGATG ACAGCATCCA ATATTATCAG TCGTCTCTTA GGGGCACTCT ATATTATTCC TTGGTATGCT TGGATGGGCA AACAGGGTGA CCAAGCCAAT GCTCTCTTTG GTCAGGGATA TAATATTTAT GCCCTTTTCC TTTTGATTTC GACAGCAGGG ATTCCAGTCG CCATTGCCAA GCAGGTATCA AAATATAACA CACTTGGAAA GATGGAAACG AGTTTCTTCT TACTCAAACG TATCTTGTAT TATATGATTG GGCTTGGACT AATTTTTGGT GTTTTCATGT ATTTTGCTTC TCCGTGGATG TCATATCTTT CTGGGGGAGA CGAAGACCTG GTTCGAGTAA TGCGCAGCCT TTCTTGGGCG GTTGTCATTT TTCCATCGAT GTCTGTTTTA CGAGGCTTTT TCCAGGGCTT TAACAACATG AAGCCTTATG CCCTAAGTCA GATTGCGGAG CAGATTATCC GTGTCATTTG GATGCTGTTG GCGACTTTCT TCATCATGAA AATTGGTACA GGTGACTATG TGACTGCAGT TGTCCAATCG ACTTTTGCTG CTTTCATCGG TATGTTGGCT AGTTATGGGG TACTTTTCTT CTATCTTTGG AAAGAAGGCA AGCTCAAGAG CCTTTTTGGT AAGCAGGCCG TTCATCCTGA TATCAATCCA ACTGCAATTG TTATTGAGAC ATTTAAGGAA GCCATTCCCT TCATTATTAC TGGATCAGCG GTTCAACTTT TCCAGTTGAT TGATCAATGG ACTTTTATCC GTACTATGGA GAGGTTTACA AGCTATAGTA ATAGTCAGCT TCAGGTTCTC TATGCTTATT TGTCTTCAAA CCCAAGTAAG ATTACTATGA TTTTGATTGC CGTTGCTATT TCTATTGCTG GGGTCGGCAT CCCACTTCTG ACAGAAAATA TGGTTAAAAA GGACCTTGGG GGAGCAGCCA AACTCATTAT TAATAATCTC CAGTTACTTT TGCTCTTTAT TATACCAGCC ATTGCGGGTT CTGTGATTTT GGCCAAGCCA TTATACACTG TCTTTTATGG AGCACCAGAC AGTCAGGCTC TTTTACTCTT CGTAGCTAGT TTGATTCAAG TGATTTTCTT AGCTTTGTAT AGTGTTTTAG CACCAATGCT TCAGGCTATC TTTGAGACCC GTAAAGCTAT CAATTATTTT GCGATTGGGG TGCTGATTAA GGCCATTCTA CAGCTACCGT TGATTATTTT TTTAGGAGCC CTCGGTCCGG TTATTTCAAC AGCCATTGGG TTAGGAGTTC CTATTGCTTT GATGTATAAT CGCCTTCACA CAGTTACTCA CTTTAGTCGT AAGATAGTCT TTAGAAAAGC TCTACTCATT TGTATTATTA CAATGCTCAT GGTTATTCCA GTTGCTGTTT TCTATTGGTT ATTCCAATTT GTCCTATCTC CAACAAGTCG TATGGGTAGT GTGATTTACT TAGTGATTGG AGGAGGTCTT GGCGTTTTGG TCTATGGAGT GCTTGCTCTT GTGACACATA TGGCTGATCA ATTGCTTGGC GCACGAGCAG GTAGATTACG AGCTAAATTA CATATTAAAT AG
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Protein sequence | MTETKTDTQQ QQMLRGTAWM TASNIISRLL GALYIIPWYA WMGKQGDQAN ALFGQGYNIY ALFLLISTAG IPVAIAKQVS KYNTLGKMET SFFLLKRILY YMIGLGLIFG VFMYFASPWM SYLSGGDEDL VRVMRSLSWA VVIFPSMSVL RGFFQGFNNM KPYALSQIAE QIIRVIWMLL ATFFIMKIGT GDYVTAVVQS TFAAFIGMLA SYGVLFFYLW KEGKLKSLFG KQAVHPDINP TAIVIETFKE AIPFIITGSA VQLFQLIDQW TFIRTMERFT SYSNSQLQVL YAYLSSNPSK ITMILIAVAI SIAGVGIPLL TENMVKKDLG GAAKLIINNL QLLLLFIIPA IAGSVILAKP LYTVFYGAPD SQALLLFVAS LIQVIFLALY SVLAPMLQAI FETRKAINYF AIGVLIKAIL QLPLIIFLGA LGPVISTAIG LGVPIALMYN RLHTVTHFSR KIVFRKALLI CIITMLMVIP VAVFYWLFQF VLSPTSRMGS VIYLVIGGGL GVLVYGVLAL VTHMADQLLG ARAGRLRAKL HIK
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