Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0378 |
Symbol | |
ID | 4437935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 330639 |
End bp | 331865 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676108 |
Product | transcriptional regulator |
Protein accession | YP_819875 |
Protein GI | 116627256 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0016641 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTG GACGAAAAAT TTTATTGATG TTGTCGGCAA TTCTTGCCAC CACAGTAGTA GCTGCTGGTA TTTATCTAAC GACAACTTAT AATTATGCTA CAGGAGAATT GTCAAAAACC TTTAGAGTAT CAAAGGTAAC GTCAGGGAAT AGTAAGGCTA TTCAACAGAC AAAGCCTATA ACTATTCTTT TGATGGGGGT GGATACAGGA TCCAAAGGAC GTAAGGAAAC CTGGGAAGGA AATTCTGATA CTATGATTTT GGTAACAGTG AATCCTAAGA CTAAGAGAAC TACCATGACC AGTTTGGAAC GTGACCTTTT GGCAGATGTT GAGGGATCGG GTGAAGCAAA ACTAAACTCA GCCTATGCTG AGGGTGGGGC TGACTTAGCT ATTTCAACCA TTCAAAAGGT TTTAGATATT GATATTGACT ACTATGCGCT GATTAATATG CATGGTATGA TTGATTTGGT GGATGCCGTT GGTGGTATCG AGGTAACGAA CCATTTTGAT TTCCCAATTT CGATTGCAGA AAATGAACCA GAATTTCAGG CGAAAGTAGA GCCTGGAACC CATAAAATCA ATGGAGAACA GGCCTTAGTG TATTCACGTA TGCGTTATGA TGATCCCGAT GGTGATTACG GTCGTCAAAA ACGTCAACGT GAGGTTATTC AAAAGATTGT GGCTAAGCTC TTGAAGATGG ACTCGATAGG TTCTTATAAG AAAATTTTGT CTGCTGTCAG TTCGAATGTA CAAACAAGTA TCAATCTTGG TGATAGCACT ACTCTGCGTG GTTTGATGGG TTATAGTGAG GCCCTTAAAA ATATCAAGTC TTACCAGTTG GCTGGTTCGG ATGCAATGAT CAATGGTGGA AGCTACCAAG TAGCCTCAAC TGAGGATATT CTTAAGGTCC AAAACCGTAT TAAGAAGGAA GTTGGCAAGA AGGGAGTTTC TGAATCTAAA CTTAAGACTA GTTTGGTACT CAATGATTTT GGGACTTCTA GCTATGTTTC AGATGATTTC GTTAACTCTA CTGGAAGTTA TGAGGCTGGA CCATCTGAGG CAACAGGTGG TGGATCAGTA AGTACCTACT ATGGAGGTAC CACCTACGGC AATAGCTACA CTGAGAATAC TAGTAATTAT GTTCAGGACC AAGCTACAAC TGCCCCTACA ATTAATTATA ATGGTTCAGG TGTAACTACT TATAACTTGG TTCCAGCAGC ACAATAG
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Protein sequence | MKLGRKILLM LSAILATTVV AAGIYLTTTY NYATGELSKT FRVSKVTSGN SKAIQQTKPI TILLMGVDTG SKGRKETWEG NSDTMILVTV NPKTKRTTMT SLERDLLADV EGSGEAKLNS AYAEGGADLA ISTIQKVLDI DIDYYALINM HGMIDLVDAV GGIEVTNHFD FPISIAENEP EFQAKVEPGT HKINGEQALV YSRMRYDDPD GDYGRQKRQR EVIQKIVAKL LKMDSIGSYK KILSAVSSNV QTSINLGDST TLRGLMGYSE ALKNIKSYQL AGSDAMINGG SYQVASTEDI LKVQNRIKKE VGKKGVSESK LKTSLVLNDF GTSSYVSDDF VNSTGSYEAG PSEATGGGSV STYYGGTTYG NSYTENTSNY VQDQATTAPT INYNGSGVTT YNLVPAAQ
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