Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0356 |
Symbol | nrdR |
ID | 4437120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 312381 |
End bp | 312860 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676087 |
Product | transcriptional regulator NrdR |
Protein accession | YP_819854 |
Protein GI | 116627235 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000016324 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTGTC CAAAATGTCA ACATAATAAA TCTAATGTTA TCGATAGCCG TCAGGCAGAG GATGGAAATA CCATTCGTCG TCGTCGAGAG TGTGATGCTT GTCATGCCCG TTTTACTACA TTTGAGCGTG TGGAAGAAGT TCCACTTTTA GTTGTCAAAA AAGACGGTAC TCGTGAACAA TTCTCTCGCG ATAAGATTTT CAATGGTATC TCGATGAGTG CTCAGAAGCG TCCAGTTTCA AGTGAGGATA TTGAAAATGC CATCACCCGT ATAGAGAAAA ACATTCGCCG TAACCATGAT GGAGAGGTTG ATAGTGAGGT CATTGGGAAT TTAGTCATGA AAGAACTAGC AGATCTTGAT GAAATTACCT ATGTCCGTTT TGCTAGTGTC TACCGTTCTT TCAAAGATGT TGATGAGATT GAAGAATTGC TTCAAGAAAT TACCAAGACT GTCCGTGCGA AAAAAGAGTC TAAAAAATGA
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Protein sequence | MRCPKCQHNK SNVIDSRQAE DGNTIRRRRE CDACHARFTT FERVEEVPLL VVKKDGTREQ FSRDKIFNGI SMSAQKRPVS SEDIENAITR IEKNIRRNHD GEVDSEVIGN LVMKELADLD EITYVRFASV YRSFKDVDEI EELLQEITKT VRAKKESKK
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