| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0259 |
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| Symbol | |
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| ID | 4438383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 220741 |
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| End bp | 221613 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639676001 |
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| Product | ribosomal large subunit pseudouridine synthase, RluD subfamily |
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| Protein accession | YP_819769 |
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| Protein GI | 116627150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAC ACGTAGAAAT TATCAATCCC TACCCTGCAA CAACTGTCAA AGAATTACTA
GAAACCAAAC TCCTCATTCC TCGTAAGATT CGTCATTTCC TACGCACGAA AAAACATGTC
CTTATCAATG GAGAAACTAT TAATTGGCAG AGTCCTGTTA AAGAAGGTGA TAGGATTAGC
CTGACCTTTG ACACAGAGGA CTATCCTAAT AAAACTATCC CTATGGGAGA TGCCAATTTG
GTAAAGCCTC TCTATGAGGA TTCGCATATC ATCGTGGTCA ATAAGCCTGA AGGAATGAAG
ACGCATGGCA ATAAACCCAC AGAAATCGCT CTTCTTAACC ATGTTTCGGC TTATTGTGGG
CAAACCTGTT ACGTCGTTCA TCGACTAGAT ATGGAAACTA GTGGAGCTGT GCTTTTCGCT
AAAAATCCGT TTATCCTGCC AATTCTTAAC CGGCTTTTAG AAGATAAGAT GATTCAGCGT
CAATACTGGG CATTGACTGA AGGTAAATTT CAGACCAAGA AAACTGTTTA TAAGGACAAG
ATTGGACGCG ACCGCCACGA TCGTAGAAAA CGGGTGGTGG ATCCTCGAAA AGGGCAGAGT
GCGTATACAA CCGTCACACG TCTCAAAACC TTTGAAGGAG CCAGTCTGGT CAACTGCCAA
CTAAAAACCG GCCGAACTCA CCAAATTCGT GTGCATCTGT CCCATCACGG TCATGCTATT
CTGGGGGACC CACTTTACAG TCATCAGCCA TCATCTAGAC TCATGCTACA CGCCCACTCC
CTTAGCTTCA CTCACCCCTT AACACTCGAA AAAGTCACTG TTAAGGTTAA ATCAGAAAGT
TTTGAACAAG TGTTGAGAAA TCACAAATCA TAA
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| Protein sequence | MTLHVEIINP YPATTVKELL ETKLLIPRKI RHFLRTKKHV LINGETINWQ SPVKEGDRIS
LTFDTEDYPN KTIPMGDANL VKPLYEDSHI IVVNKPEGMK THGNKPTEIA LLNHVSAYCG
QTCYVVHRLD METSGAVLFA KNPFILPILN RLLEDKMIQR QYWALTEGKF QTKKTVYKDK
IGRDRHDRRK RVVDPRKGQS AYTTVTRLKT FEGASLVNCQ LKTGRTHQIR VHLSHHGHAI
LGDPLYSHQP SSRLMLHAHS LSFTHPLTLE KVTVKVKSES FEQVLRNHKS
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