Gene STER_0139 details

Gene Information

• Locus tag: STER_0139
• ID: 4436876
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 113500
• End bp: 114180
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 639675895
• Product: transposase
• Protein accession: YP_819681
• Protein GI: 116627062
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3316] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCATT TTAAAGGCAA ACAATTCAAA AAAGACGTCA TTATTGTCGC TGTTGGTTAC 
TACCTGCGTT ACAATCTAAG CTATCGTGAA GTTCAGGAAT TGTTATATGA TCGTGGAATA 
AATGTTTGTC ATACTACGAT TTATCGTTGG GTGCAAGAGT ACAGCAAAGT CCTCTATTAT 
CTTTGGAAGA AGAAAAATAG ACAATCCTTC TATTCATGGA AAATGGACGA AACCTATATC 
AAAATTAAGG GACGTTGGCA TTATCTTTAT CGTGCAATTG ATGCGGACGG CTTAACCTTA 
GATATCTGGT TACGAAAGAA ACGGGATACG CAAGCAGCCT ATGCTTTCTT AAAACGACTC 
CATAAACAGT TTGGTGAGCC GAAATCAATT GTGACCGATA AAGCACCTTC TCTTGGCTCC 
GCCTTTAGAA AGTTACAGAG TGTGGGTTTA TATCCTAAGA CAGAGCACCG AACTGTGAAG 
TATCTTAACC ATTTAATAGA ACAAGACCAT CGACCTATTA AACGACGGAA TAAATTTTAT 
CAAAGTCTCC GTACAGCCTC TTCCACGATT AAGGGCATGG AGACCCTTCG AGGAAGATAT 
AAAAAGAACC GAAGAAATGG AACGCTCTTC GGCTTTTCGG TGTCTACTGA AATCAAGGTA 
TTAATGGGAA TAACAGCCTA A 

 

Protein sequence

MNHFKGKQFK KDVIIVAVGY YLRYNLSYRE VQELLYDRGI NVCHTTIYRW VQEYSKVLYY 
LWKKKNRQSF YSWKMDETYI KIKGRWHYLY RAIDADGLTL DIWLRKKRDT QAAYAFLKRL 
HKQFGEPKSI VTDKAPSLGS AFRKLQSVGL YPKTEHRTVK YLNHLIEQDH RPIKRRNKFY 
QSLRTASSTI KGMETLRGRY KKNRRNGTLF GFSVSTEIKV LMGITA