Gene STER_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0095 
SymbolpolC 
ID4438148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp72798 
End bp77192 
Gene Length4395 bp 
Protein Length1464 aa 
Translation table11 
GC content39% 
IMG OID639675858 
ProductDNA polymerase III PolC 
Protein accessionYP_819645 
Protein GI116627026 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA AATTTAAGCT TCTTTTAAAA CAAATTCATT TTCCACAGCA TGAGGAAGCT 
TATAATGAAA TTAAAAGTGG TTCTATTGAA TCAGTAAAGC TATTTAAATC AAAACGTCAG
TGGTTTTTTG TTTTTTCTTT CAGAAATCTA CTGTCATATG AGACTTTCAC TCTTTTTGAT
AATCTGCTTC ATTCTTCTTT TGATTCTTTA GGGGCTAAAG TTTCATATAT GATTAATGTA
GAAGATATTT CTTGTGATCA ATCTTTACTT GAAGCTTATT TTTCATATGC TTTAGATATT
TTAAAATCAT CACACTTTTC AATCTATTCC CTATTCTCCA ATTTGGGGAT TGAGATTTCT
AATAATAGTA TTTCTGTTAA GGCTCCTGCG CATATCCTTA GAGAGAATTT ACATGAGAGA
TTTATAGCCC TGATTGCTGA TGTTCTTTCG AATGTTGGTT TATCTAATGT TTCTATTTCG
GTTCTTGAGG ATAAAGAAGC TTCATCCTCT CTTGAAGAGG CTTACGAGAC AAATAAGATC
TCCTTACAAG AAGAGGCAGA ATCTCAAGCT AGACAAGCAC TTCAATCAAT TGTTCAAAGT
TCGCCGGTAC CACCACCTCA GAAGCATCAG GCCCAAAATT TTGCTGAGAA ACAAAGTCAA
CGAGTTGCAA GCTTTGATAA GGCTGAGATT ACTCCAATGA TTGAAGTCAA TTCTGAAGAA
AATAGGATTG TTTTTGAAGG ATATATTTTT GATGTAGAGC AACGTGAAAC GAAAACAGGT
AGGATTATAA TAAATTTTAA GGTAACTGAT TATACCTCTA GTTTTGCTAT GCAACGTTGG
GTGAAGGATA GCGAAGAACT TGTTAAGTTC GGTATGATTA AAAAAGGAAA CTGGGTAAGA
GTTCGAGGTC GTATTGAGAA TAATCCTTTT ACACATAGTT TGACTATGAA CGTACAAGAT
ATTAAGGAAA TTTCTCATAC TCCTCGTAAG GATTTGATGC CCGAGGGACA GAAGCGAGTT
GAATTTCATG CTCATACTAA CATGTCAACT ATGGATGCTA TACCAACAGT TGAAGAGCTC
ATCGATACAG CGGCTTTTTG GGGACATCCA GCAGTTGCGA TAACAGATCA TGCAAATGTT
CAAAGTTTTC CTCATGGCTA CCATAAAGCT AAGAAAGCTG GAATTAAGGC GATTTTTGGT
CTTGAAGCCA ATCTTGTTGA GGACAAAGTT CCTATTGTTT ATAATTCCGA AAATTTGGAA
TTAAAAGAAG CAACTTATGT TGTATTCGAC GTAGAAACAA CAGGTTTGTC TGCTGTTCAT
AATGATTTGA TCCAGATTGC GGCATCAAAA ATGCATAAAG GTAATATTGT TGAGCAATTT
GATGAATTCA TTGATCCTGG ATATCCGCTT TCTGCGTTTA CGACTGAATT GACTGGTATT
ACTGATAATC ATGTTAAAGG TGCCAAACCT TTAGTGCAAG TTTTACAGGA GTTTCAAGAA
TTCTGTAAAG GAGCTGTGCT AGTCGCCCAC AATGCGACCT TTGACGTTGG GTTTATGAAT
GCCAATTATG AAAGACATCA GTTACCGACA ATCTCACAAC CGGTTATTGA TACTTTAGAA
TTTGCACGGA ATCTTTATCC TGAGTATAAA CGTCATGGTT TGGGTCCTTT GACAAAGCGT
TTTGGCGTTG CCTTGGACCA CCACCACATG GCCAACTATG ATGCGGAAGC AACAGGTCGT
TTGTTGTTTA TTTTCATTAA AGATGTATTC GAAAAGCATG GATTGACTAA TCTGGAACAG
TTGAACACAG AATTGGTCTC TGATGATTCG TATAAGAAGT CTCGTGTCAA ACATGCGACA
CTATATGTTC AGAATCAAAC GGGTTTGAAG AATCTCTTTA AATTGGTAAG CCTATCAAAT
GTATCATATT TTGAGGGAGT AGCCCGTATT CCTCGTAAGG TTTTAGATGA GTATCGTGAG
GGAATCATAG TCGGTTCCGC ATGTGCAGAT GGTGAAGTTT TTGATACTCT CTTGTCTCAT
GGTATTGATA AGGCAGTTGA AGTTGCTAAA TACTATGATT TTATTGAAGT TATGCCACCA
GCGATTTATG CGCCATTGAT TGCAAAGGAT TTAATCAAGG ATGAGGGAGC TATAGAACAA
CTTATTAAAG ATTTGATTGA AGTTGCTAAT CGTCTTGACA AGCCTGTGCT TGCTACGGGA
AATGTACATT ATATCAATCC TGAAGATGCC ATTTATCGTG AAATCATTGT TCGTGCTTTG
GGACAAGGAG CTATGATCAA TAGACCAATT GGTAAGGGGG AAAACGCTCA ACCTGCTCCT
CTACCGGAAG CTCATTTTAG AACAACCAAT GAGATGCTAG ACGAATTTGC CTTTTTGGGG
AAAGACTTAG CCTATGAAAT TGTTGTAGCT AATACACAAG CTATGGCAAA TCAAATCGAA
GAGGTTGAAG TCGTCAAAAA AGACTTGTAT ACACCTTATA TTGATCGTGC AGAAGAACAG
GTTGCAGAGA TGACTTATGC TAAAGCATTT GAGCTTTATG GTAATCCTTT GCCTGATATT
ATTGACTTGC GGATTGAGAA AGAGTTGTCC TCAATTCTTG GTAATGGATT TGCCGTAATA
TATCTAGCAT CGCAGATGCT GGTGAACCGT TCAAATGAAC GTGGCTACCT GGTTGGCTCT
CGGGGGTCTG TTGGCTCTAG TTTTGTTGCA ACAATGATTG GAATTACTGA GGTAAATCCT
ATGCCACCTC ATTATTTATG TCCTAAATGC CAACACTCAG AGTTTATCAC GGATGGTTCT
TATGGCTCTG GCTTTGATTT GCCTGATAAG GAGTGCTCAG AATGTGGAAC TGAGTATAAA
AAAGATGGTC AGGATATTCC TTTCGAGACC TTCCTCGGTT TTGATGGGGA TAAGGTTCCT
GATATTGATT TGAACTTCTC AGGAGATGAT CAGCCGTCGG CTCACTTGGA TGTACGTGAT
ATTTTTGGAG AGCAATATGC CTTCCGTGCT GGAACGGTAG GTACTGTTGC AGATCGGACA
GCTTATGGTT TTGTCAAGGG TTACGAACGT GATTACAATA AGTTCTATCG TGATGCTGAG
GTTGATCGTT TGGCTATGGG TGTTGCTGGG GTTAAGCGAA ATACAGGTCA GCACCCAGGT
GGTATCGTTG TTATTCCAAA TTATATGGAT GTCTATGATT TTACACCTGT TCAATATCCG
GCTGATGATG TAACTGCTGC TTGGCAGACA ACTCACTTTA ACTTCCACGA TATCGATGAG
AACGTGTTGA AGCTAGATAT TCTGGGACAT GATGATCCGA CTATGATTCG TAAGTTACAG
GACCTATCAG GAATTGATCC AAAGGATATT CGAGCAGATG ATCCGGATGT GATGAAACTT
TTTTCAGGGA CTGAGGTTTT AGGGGTAACG CCTGAACAAA TTGGGACCTC AACGGGCGTG
TTGGGAATCC CTGAGTTTGG GACTAACTTT GTTCGTGGTA TGGTCGAAGA GACGCATCCG
ACGACCTTTG CGGAACTCTT ACAGTTATCT GGTTTATCCC ATGGTACAGA TGTTTGGTTG
GGTAATGCAC AAGATTTGAT TAAGGAAGGT ATTGCCACCC TGAAAACAGT TATCGGTTGT
CGTGACGATA TCATGGTATA CCTAATGCAT GCAGGGTTAG ATCCTAAGAT GGCCTTTACC
ATTATGGAAC GTGTGCGTAA GGGAATGTGG TTGAAAATTT CTGAAGAAGA GCGAAATGGT
TATATTCAAG CCATGCGTGA AAATAATGTT CCGGACTGGT ATATTGAATC TTGTGGTAAA
ATCAAGTACA TGTTCCCTAA AGCCCATGCG GCTGCCTACG TTATGATGGC CCTTCGCGTA
GCTTATTTCA AGGTGCACCA TCCTATTTAT TACTATTGTG CTTACTTCTC GATTCGAGCC
AAAGCATTTG AGCTTAAGAC GATGTCTGCA GGGCTCGATG CTGTTAAAGC TCGAATGGAA
GATATTAAGG AGAAGCGCCA ACGAAATGAA GCTACTAATC TTGAAAATGA CTTGTTTACA
ACGCTTGAAA TTGTCAATGA AATGTTAGAA CGTGGCTTTA CTTTTGGCCA GTTAGATCTT
TATAAGAGTC AGGCGACTGA ATTTTTGATT GAAGGAGATA CCTTGATTCC TCCGTTTATC
GCACTTGAAG GTTTGGGTGA AAACGTTGCG AAGCAATTGG TTGCTGCGCG TGAAGAAGGG
GAATTCCTCT CCAAAACAGA ATTGCGTAAA CGAGGAGGCC TATCATCAAC CTTGGTTGAA
AGATTAGATG AAATGGGCAT TCTAGGAAAT ATGCCAGAAG ATAATCAGTT AAGTCTTTTT
GATGATTTCT TTTAA
 
Protein sequence
MSDKFKLLLK QIHFPQHEEA YNEIKSGSIE SVKLFKSKRQ WFFVFSFRNL LSYETFTLFD 
NLLHSSFDSL GAKVSYMINV EDISCDQSLL EAYFSYALDI LKSSHFSIYS LFSNLGIEIS
NNSISVKAPA HILRENLHER FIALIADVLS NVGLSNVSIS VLEDKEASSS LEEAYETNKI
SLQEEAESQA RQALQSIVQS SPVPPPQKHQ AQNFAEKQSQ RVASFDKAEI TPMIEVNSEE
NRIVFEGYIF DVEQRETKTG RIIINFKVTD YTSSFAMQRW VKDSEELVKF GMIKKGNWVR
VRGRIENNPF THSLTMNVQD IKEISHTPRK DLMPEGQKRV EFHAHTNMST MDAIPTVEEL
IDTAAFWGHP AVAITDHANV QSFPHGYHKA KKAGIKAIFG LEANLVEDKV PIVYNSENLE
LKEATYVVFD VETTGLSAVH NDLIQIAASK MHKGNIVEQF DEFIDPGYPL SAFTTELTGI
TDNHVKGAKP LVQVLQEFQE FCKGAVLVAH NATFDVGFMN ANYERHQLPT ISQPVIDTLE
FARNLYPEYK RHGLGPLTKR FGVALDHHHM ANYDAEATGR LLFIFIKDVF EKHGLTNLEQ
LNTELVSDDS YKKSRVKHAT LYVQNQTGLK NLFKLVSLSN VSYFEGVARI PRKVLDEYRE
GIIVGSACAD GEVFDTLLSH GIDKAVEVAK YYDFIEVMPP AIYAPLIAKD LIKDEGAIEQ
LIKDLIEVAN RLDKPVLATG NVHYINPEDA IYREIIVRAL GQGAMINRPI GKGENAQPAP
LPEAHFRTTN EMLDEFAFLG KDLAYEIVVA NTQAMANQIE EVEVVKKDLY TPYIDRAEEQ
VAEMTYAKAF ELYGNPLPDI IDLRIEKELS SILGNGFAVI YLASQMLVNR SNERGYLVGS
RGSVGSSFVA TMIGITEVNP MPPHYLCPKC QHSEFITDGS YGSGFDLPDK ECSECGTEYK
KDGQDIPFET FLGFDGDKVP DIDLNFSGDD QPSAHLDVRD IFGEQYAFRA GTVGTVADRT
AYGFVKGYER DYNKFYRDAE VDRLAMGVAG VKRNTGQHPG GIVVIPNYMD VYDFTPVQYP
ADDVTAAWQT THFNFHDIDE NVLKLDILGH DDPTMIRKLQ DLSGIDPKDI RADDPDVMKL
FSGTEVLGVT PEQIGTSTGV LGIPEFGTNF VRGMVEETHP TTFAELLQLS GLSHGTDVWL
GNAQDLIKEG IATLKTVIGC RDDIMVYLMH AGLDPKMAFT IMERVRKGMW LKISEEERNG
YIQAMRENNV PDWYIESCGK IKYMFPKAHA AAYVMMALRV AYFKVHHPIY YYCAYFSIRA
KAFELKTMSA GLDAVKARME DIKEKRQRNE ATNLENDLFT TLEIVNEMLE RGFTFGQLDL
YKSQATEFLI EGDTLIPPFI ALEGLGENVA KQLVAAREEG EFLSKTELRK RGGLSSTLVE
RLDEMGILGN MPEDNQLSLF DDFF