Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0095 |
Symbol | polC |
ID | 4438148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 72798 |
End bp | 77192 |
Gene Length | 4395 bp |
Protein Length | 1464 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639675858 |
Product | DNA polymerase III PolC |
Protein accession | YP_819645 |
Protein GI | 116627026 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATA AATTTAAGCT TCTTTTAAAA CAAATTCATT TTCCACAGCA TGAGGAAGCT TATAATGAAA TTAAAAGTGG TTCTATTGAA TCAGTAAAGC TATTTAAATC AAAACGTCAG TGGTTTTTTG TTTTTTCTTT CAGAAATCTA CTGTCATATG AGACTTTCAC TCTTTTTGAT AATCTGCTTC ATTCTTCTTT TGATTCTTTA GGGGCTAAAG TTTCATATAT GATTAATGTA GAAGATATTT CTTGTGATCA ATCTTTACTT GAAGCTTATT TTTCATATGC TTTAGATATT TTAAAATCAT CACACTTTTC AATCTATTCC CTATTCTCCA ATTTGGGGAT TGAGATTTCT AATAATAGTA TTTCTGTTAA GGCTCCTGCG CATATCCTTA GAGAGAATTT ACATGAGAGA TTTATAGCCC TGATTGCTGA TGTTCTTTCG AATGTTGGTT TATCTAATGT TTCTATTTCG GTTCTTGAGG ATAAAGAAGC TTCATCCTCT CTTGAAGAGG CTTACGAGAC AAATAAGATC TCCTTACAAG AAGAGGCAGA ATCTCAAGCT AGACAAGCAC TTCAATCAAT TGTTCAAAGT TCGCCGGTAC CACCACCTCA GAAGCATCAG GCCCAAAATT TTGCTGAGAA ACAAAGTCAA CGAGTTGCAA GCTTTGATAA GGCTGAGATT ACTCCAATGA TTGAAGTCAA TTCTGAAGAA AATAGGATTG TTTTTGAAGG ATATATTTTT GATGTAGAGC AACGTGAAAC GAAAACAGGT AGGATTATAA TAAATTTTAA GGTAACTGAT TATACCTCTA GTTTTGCTAT GCAACGTTGG GTGAAGGATA GCGAAGAACT TGTTAAGTTC GGTATGATTA AAAAAGGAAA CTGGGTAAGA GTTCGAGGTC GTATTGAGAA TAATCCTTTT ACACATAGTT TGACTATGAA CGTACAAGAT ATTAAGGAAA TTTCTCATAC TCCTCGTAAG GATTTGATGC CCGAGGGACA GAAGCGAGTT GAATTTCATG CTCATACTAA CATGTCAACT ATGGATGCTA TACCAACAGT TGAAGAGCTC ATCGATACAG CGGCTTTTTG GGGACATCCA GCAGTTGCGA TAACAGATCA TGCAAATGTT CAAAGTTTTC CTCATGGCTA CCATAAAGCT AAGAAAGCTG GAATTAAGGC GATTTTTGGT CTTGAAGCCA ATCTTGTTGA GGACAAAGTT CCTATTGTTT ATAATTCCGA AAATTTGGAA TTAAAAGAAG CAACTTATGT TGTATTCGAC GTAGAAACAA CAGGTTTGTC TGCTGTTCAT AATGATTTGA TCCAGATTGC GGCATCAAAA ATGCATAAAG GTAATATTGT TGAGCAATTT GATGAATTCA TTGATCCTGG ATATCCGCTT TCTGCGTTTA CGACTGAATT GACTGGTATT ACTGATAATC ATGTTAAAGG TGCCAAACCT TTAGTGCAAG TTTTACAGGA GTTTCAAGAA TTCTGTAAAG GAGCTGTGCT AGTCGCCCAC AATGCGACCT TTGACGTTGG GTTTATGAAT GCCAATTATG AAAGACATCA GTTACCGACA ATCTCACAAC CGGTTATTGA TACTTTAGAA TTTGCACGGA ATCTTTATCC TGAGTATAAA CGTCATGGTT TGGGTCCTTT GACAAAGCGT TTTGGCGTTG CCTTGGACCA CCACCACATG GCCAACTATG ATGCGGAAGC AACAGGTCGT TTGTTGTTTA TTTTCATTAA AGATGTATTC GAAAAGCATG GATTGACTAA TCTGGAACAG TTGAACACAG AATTGGTCTC TGATGATTCG TATAAGAAGT CTCGTGTCAA ACATGCGACA CTATATGTTC AGAATCAAAC GGGTTTGAAG AATCTCTTTA AATTGGTAAG CCTATCAAAT GTATCATATT TTGAGGGAGT AGCCCGTATT CCTCGTAAGG TTTTAGATGA GTATCGTGAG GGAATCATAG TCGGTTCCGC ATGTGCAGAT GGTGAAGTTT TTGATACTCT CTTGTCTCAT GGTATTGATA AGGCAGTTGA AGTTGCTAAA TACTATGATT TTATTGAAGT TATGCCACCA GCGATTTATG CGCCATTGAT TGCAAAGGAT TTAATCAAGG ATGAGGGAGC TATAGAACAA CTTATTAAAG ATTTGATTGA AGTTGCTAAT CGTCTTGACA AGCCTGTGCT TGCTACGGGA AATGTACATT ATATCAATCC TGAAGATGCC ATTTATCGTG AAATCATTGT TCGTGCTTTG GGACAAGGAG CTATGATCAA TAGACCAATT GGTAAGGGGG AAAACGCTCA ACCTGCTCCT CTACCGGAAG CTCATTTTAG AACAACCAAT GAGATGCTAG ACGAATTTGC CTTTTTGGGG AAAGACTTAG CCTATGAAAT TGTTGTAGCT AATACACAAG CTATGGCAAA TCAAATCGAA GAGGTTGAAG TCGTCAAAAA AGACTTGTAT ACACCTTATA TTGATCGTGC AGAAGAACAG GTTGCAGAGA TGACTTATGC TAAAGCATTT GAGCTTTATG GTAATCCTTT GCCTGATATT ATTGACTTGC GGATTGAGAA AGAGTTGTCC TCAATTCTTG GTAATGGATT TGCCGTAATA TATCTAGCAT CGCAGATGCT GGTGAACCGT TCAAATGAAC GTGGCTACCT GGTTGGCTCT CGGGGGTCTG TTGGCTCTAG TTTTGTTGCA ACAATGATTG GAATTACTGA GGTAAATCCT ATGCCACCTC ATTATTTATG TCCTAAATGC CAACACTCAG AGTTTATCAC GGATGGTTCT TATGGCTCTG GCTTTGATTT GCCTGATAAG GAGTGCTCAG AATGTGGAAC TGAGTATAAA AAAGATGGTC AGGATATTCC TTTCGAGACC TTCCTCGGTT TTGATGGGGA TAAGGTTCCT GATATTGATT TGAACTTCTC AGGAGATGAT CAGCCGTCGG CTCACTTGGA TGTACGTGAT ATTTTTGGAG AGCAATATGC CTTCCGTGCT GGAACGGTAG GTACTGTTGC AGATCGGACA GCTTATGGTT TTGTCAAGGG TTACGAACGT GATTACAATA AGTTCTATCG TGATGCTGAG GTTGATCGTT TGGCTATGGG TGTTGCTGGG GTTAAGCGAA ATACAGGTCA GCACCCAGGT GGTATCGTTG TTATTCCAAA TTATATGGAT GTCTATGATT TTACACCTGT TCAATATCCG GCTGATGATG TAACTGCTGC TTGGCAGACA ACTCACTTTA ACTTCCACGA TATCGATGAG AACGTGTTGA AGCTAGATAT TCTGGGACAT GATGATCCGA CTATGATTCG TAAGTTACAG GACCTATCAG GAATTGATCC AAAGGATATT CGAGCAGATG ATCCGGATGT GATGAAACTT TTTTCAGGGA CTGAGGTTTT AGGGGTAACG CCTGAACAAA TTGGGACCTC AACGGGCGTG TTGGGAATCC CTGAGTTTGG GACTAACTTT GTTCGTGGTA TGGTCGAAGA GACGCATCCG ACGACCTTTG CGGAACTCTT ACAGTTATCT GGTTTATCCC ATGGTACAGA TGTTTGGTTG GGTAATGCAC AAGATTTGAT TAAGGAAGGT ATTGCCACCC TGAAAACAGT TATCGGTTGT CGTGACGATA TCATGGTATA CCTAATGCAT GCAGGGTTAG ATCCTAAGAT GGCCTTTACC ATTATGGAAC GTGTGCGTAA GGGAATGTGG TTGAAAATTT CTGAAGAAGA GCGAAATGGT TATATTCAAG CCATGCGTGA AAATAATGTT CCGGACTGGT ATATTGAATC TTGTGGTAAA ATCAAGTACA TGTTCCCTAA AGCCCATGCG GCTGCCTACG TTATGATGGC CCTTCGCGTA GCTTATTTCA AGGTGCACCA TCCTATTTAT TACTATTGTG CTTACTTCTC GATTCGAGCC AAAGCATTTG AGCTTAAGAC GATGTCTGCA GGGCTCGATG CTGTTAAAGC TCGAATGGAA GATATTAAGG AGAAGCGCCA ACGAAATGAA GCTACTAATC TTGAAAATGA CTTGTTTACA ACGCTTGAAA TTGTCAATGA AATGTTAGAA CGTGGCTTTA CTTTTGGCCA GTTAGATCTT TATAAGAGTC AGGCGACTGA ATTTTTGATT GAAGGAGATA CCTTGATTCC TCCGTTTATC GCACTTGAAG GTTTGGGTGA AAACGTTGCG AAGCAATTGG TTGCTGCGCG TGAAGAAGGG GAATTCCTCT CCAAAACAGA ATTGCGTAAA CGAGGAGGCC TATCATCAAC CTTGGTTGAA AGATTAGATG AAATGGGCAT TCTAGGAAAT ATGCCAGAAG ATAATCAGTT AAGTCTTTTT GATGATTTCT TTTAA
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Protein sequence | MSDKFKLLLK QIHFPQHEEA YNEIKSGSIE SVKLFKSKRQ WFFVFSFRNL LSYETFTLFD NLLHSSFDSL GAKVSYMINV EDISCDQSLL EAYFSYALDI LKSSHFSIYS LFSNLGIEIS NNSISVKAPA HILRENLHER FIALIADVLS NVGLSNVSIS VLEDKEASSS LEEAYETNKI SLQEEAESQA RQALQSIVQS SPVPPPQKHQ AQNFAEKQSQ RVASFDKAEI TPMIEVNSEE NRIVFEGYIF DVEQRETKTG RIIINFKVTD YTSSFAMQRW VKDSEELVKF GMIKKGNWVR VRGRIENNPF THSLTMNVQD IKEISHTPRK DLMPEGQKRV EFHAHTNMST MDAIPTVEEL IDTAAFWGHP AVAITDHANV QSFPHGYHKA KKAGIKAIFG LEANLVEDKV PIVYNSENLE LKEATYVVFD VETTGLSAVH NDLIQIAASK MHKGNIVEQF DEFIDPGYPL SAFTTELTGI TDNHVKGAKP LVQVLQEFQE FCKGAVLVAH NATFDVGFMN ANYERHQLPT ISQPVIDTLE FARNLYPEYK RHGLGPLTKR FGVALDHHHM ANYDAEATGR LLFIFIKDVF EKHGLTNLEQ LNTELVSDDS YKKSRVKHAT LYVQNQTGLK NLFKLVSLSN VSYFEGVARI PRKVLDEYRE GIIVGSACAD GEVFDTLLSH GIDKAVEVAK YYDFIEVMPP AIYAPLIAKD LIKDEGAIEQ LIKDLIEVAN RLDKPVLATG NVHYINPEDA IYREIIVRAL GQGAMINRPI GKGENAQPAP LPEAHFRTTN EMLDEFAFLG KDLAYEIVVA NTQAMANQIE EVEVVKKDLY TPYIDRAEEQ VAEMTYAKAF ELYGNPLPDI IDLRIEKELS SILGNGFAVI YLASQMLVNR SNERGYLVGS RGSVGSSFVA TMIGITEVNP MPPHYLCPKC QHSEFITDGS YGSGFDLPDK ECSECGTEYK KDGQDIPFET FLGFDGDKVP DIDLNFSGDD QPSAHLDVRD IFGEQYAFRA GTVGTVADRT AYGFVKGYER DYNKFYRDAE VDRLAMGVAG VKRNTGQHPG GIVVIPNYMD VYDFTPVQYP ADDVTAAWQT THFNFHDIDE NVLKLDILGH DDPTMIRKLQ DLSGIDPKDI RADDPDVMKL FSGTEVLGVT PEQIGTSTGV LGIPEFGTNF VRGMVEETHP TTFAELLQLS GLSHGTDVWL GNAQDLIKEG IATLKTVIGC RDDIMVYLMH AGLDPKMAFT IMERVRKGMW LKISEEERNG YIQAMRENNV PDWYIESCGK IKYMFPKAHA AAYVMMALRV AYFKVHHPIY YYCAYFSIRA KAFELKTMSA GLDAVKARME DIKEKRQRNE ATNLENDLFT TLEIVNEMLE RGFTFGQLDL YKSQATEFLI EGDTLIPPFI ALEGLGENVA KQLVAAREEG EFLSKTELRK RGGLSSTLVE RLDEMGILGN MPEDNQLSLF DDFF
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