Gene STER_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0040 
Symbol 
ID4436779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp25595 
End bp26425 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content32% 
IMG OID639675806 
Productrod shape-determining protein MreC 
Protein accessionYP_819609 
Protein GI116626990 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA GTTTTTATCG ATTTCTTCTA TACGCGTTTG TTCTTATTCT ATTTTTTGTA 
ATGCTTATTT CTTTTGTTTT TAGAAACTAT AAATTGTCCA GGGATGTTTC TTCTAATGTC
TCGGTAGTTG TGTCTAAAGT AGATTCTGTT ATTTCAGTTC CATTTACTGC ATTAGCAAAA
TCTCATGATG TTATTTCTGA TTTTTTGTCA ACCTATTCTG AGAATCGTGA TTTAAAGAAA
TCATTATCTA CTTTAGAAAA TCAATCTGCT GTCATCTCTA ATTTACAAGA AGAAAATGAC
TCTTTGAGAG CTTCTTTAAA TCTTTCGGAT AAACTTAGTC GTAACAATGT AATTACTGCT
GAGGTTTCAA TGCGTCCATC TGTCACCTGG TTGAAGGAGT TAACGATTAA TGTTGGAAAG
TCTAAGAGTG TTAGTAAGTC TATGTTGGCG ACTTCTAATG GTGGAGTAAT TGGTTTTATA
ACTAAAATTT ATGATCATAG TACAACTATC TCCTTACTCT CCAATAGCTC AAATGATTCT
TATATTGCTT GTAGTGTAAA AGGTGAGGAT GGAAGTCAGA TTTTTGGAAT TATATCAAGT
TATGATAATA AAAAGAAGCT TTTGGAAATG ACTCAGCTAA ATTCATCTTC TGATGTTAAG
GTTGGTTCTG AAGTGGTAAC AAGTGGCCTA GATGAAGTTT CAGTAAAAGA TGTTCCAATT
GGTAAGGTTG AATCTGTGAT TGATTATGAA GGGAATCGTA CGATTTTAGT TAAACCTTAT
GCTGATTTTG ATAAAATTTC TTATGTCACT CTTGTTGGAG AGGGTAAATA A
 
Protein sequence
MKNSFYRFLL YAFVLILFFV MLISFVFRNY KLSRDVSSNV SVVVSKVDSV ISVPFTALAK 
SHDVISDFLS TYSENRDLKK SLSTLENQSA VISNLQEEND SLRASLNLSD KLSRNNVITA
EVSMRPSVTW LKELTINVGK SKSVSKSMLA TSNGGVIGFI TKIYDHSTTI SLLSNSSNDS
YIACSVKGED GSQIFGIISS YDNKKKLLEM TQLNSSSDVK VGSEVVTSGL DEVSVKDVPI
GKVESVIDYE GNRTILVKPY ADFDKISYVT LVGEGK