Gene STER_0018 details

Gene Information

• Locus tag: STER_0018
• ID: 4436890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: +
• Start bp: 18257
• End bp: 18745
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639675784
• Product: transposase
• Protein accession: YP_819608
• Protein GI: 116626989
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2801] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.163137
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGT GCTACACAGA TGTGACAGAG TTTGCCATTC CCAATAGCAC ACATAAATTG 
TATTTATCGC CTGTTTTAGA TGGTTTCAAC AGCGAAATTA TCGCTTATAA TCTCTCAACT 
TCACCAAACT TAGAACAAGT GAAATCTATG TTAGACCAGT CCTTCACAGA GGAGCATTAT 
GAAAATACAA TTCTCCATAG TGACCAAGGT TGGCAATACC AACATCAGTA TTATCATCAA 
TTTTTAGAGG ATAAAGGGAT CAAACAGTCC ATGTCACGTA AGGGAAATAG TCCAGACAAT 
GGTATGATGG AGTCTTTCTT TGGCATTCTT AAGTCTGAGA TGTTTTATGG TTACGAGAAG 
ATGTTTCACT CACTTGAGCA ATTGGAACAA GCTATTGTAG ACTATATTGA TTATTACAAT 
AACAAACTAA TCAAGGTAAA ATTAAAAGGA CTTAGTCCTG TGCAATACAG AACTAAATCC 
TTTGTGTAA 

 

Protein sequence

MEKCYTDVTE FAIPNSTHKL YLSPVLDGFN SEIIAYNLST SPNLEQVKSM LDQSFTEEHY 
ENTILHSDQG WQYQHQYYHQ FLEDKGIKQS MSRKGNSPDN GMMESFFGIL KSEMFYGYEK 
MFHSLEQLEQ AIVDYIDYYN NKLIKVKLKG LSPVQYRTKS FV