| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_2036 |
|---|
| Symbol | |
|---|
| ID | 4423749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 2002073 |
|---|
| End bp | 2003299 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639675730 |
|---|
| Product | cysteine sulfinate desulfinase/cysteine desulfurase |
|---|
| Protein accession | YP_819479 |
|---|
| Protein GI | 116619108 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA TTAGACATGA TTTTCCAATA CTAAATCAAA CAGTCAATGG GCAAGAGCTG
CTCTATTTTG ATAGTGCGGC TACGTCACAA AAACCCCAGT ATGTGATTGA TTCATTAGTG
AATTATTATC AAAATAATAA TGCAAACGTG CATCGTGGTA TTTATGAGCT ATCAGAGCGT
GCGACACAAC AATATGAACA AGCCCGCGAT AAAGTACAAA AATTCATTCA TGCTCAAAAA
CGTGAAGAAG TTCTATTCAC TCGTGGCACA ACTGAGTCGC TTAATTGGTT GGCAAGTACT
TATGGTGCAG AAAATGTTAA ACAAGGAGAT GAAATCCTAA TATCTTACAT GGAACATCAT
TCTAATATTG TGCCGTGGCA ACAATTAGCG CAACGTGTTG GGGCTCATTT AAAATATGTC
GAACTCAATG ACGATGGCAC CTTAAATATG GCTGATCTTG AACGGAAAAT AACAGACAAA
ACTAAAATTG TATCAATCAC ACATGCTTCT AATGTGTTGG GGGTTGTTAA TCCCATAAAA
AAAATCGCAA AAATAGCCCA CAAACATGAT GCTATCATGA TTGCTGATGG CGCCCAATCT
GTTCCGCATA TGCGTGTTGA TGTGCAAGAT ATGGATGTTG ATTTTTTTGC TTTTTCGGGT
CATAAAATGC TTGGACCAAC AGGTATAGGA GTTCTTTACG GCAAACATGA TATTTTAGAA
AATATGAAAC CTGCTCAATT TGGTGGAGAA ATGATTGAAT TGGTAGACTT GCAAGAAGCG
ACCTTTCAGC CTTCACCATG GCGTTTTGAG GCGGGAACGC CCAATATTGC TGGTGCAATT
GCTTTAGGAT CCGCTATTGA TTATCTGACA AATATCGGAA TGAAAGAGGT CGAAAACTAT
GAGCAGTCTC TAGTTGATTA TGCCTTGCCA AAGCTAAAAA GTATTGCGGG TGTCACCATT
TATGGTCCGC AAAACAGTGA ACAGCATTCA GGCGTGATTG CATTTAATTT AGCAGGGGTC
CATGCCCACG ACCTAGCCAC GGCCTTGGAT CAAGAAGGAA TTGAGGTTCG TGCAGGACAT
CATTGTGCGC AGCCGCTGAT GAAATATTTG AATATTGCAG CGACAGTTCG TATTAGTTTG
TATATCTATA ATACGCGTGA AGAAATCGAT CGATTTATTA GTGTCATTGA AGATATTAAG
GAGTATTTTA ACCGTGAGTT TGCATAA
|
|---|
| Protein sequence | MKTIRHDFPI LNQTVNGQEL LYFDSAATSQ KPQYVIDSLV NYYQNNNANV HRGIYELSER
ATQQYEQARD KVQKFIHAQK REEVLFTRGT TESLNWLAST YGAENVKQGD EILISYMEHH
SNIVPWQQLA QRVGAHLKYV ELNDDGTLNM ADLERKITDK TKIVSITHAS NVLGVVNPIK
KIAKIAHKHD AIMIADGAQS VPHMRVDVQD MDVDFFAFSG HKMLGPTGIG VLYGKHDILE
NMKPAQFGGE MIELVDLQEA TFQPSPWRFE AGTPNIAGAI ALGSAIDYLT NIGMKEVENY
EQSLVDYALP KLKSIAGVTI YGPQNSEQHS GVIAFNLAGV HAHDLATALD QEGIEVRAGH
HCAQPLMKYL NIAATVRISL YIYNTREEID RFISVIEDIK EYFNREFA
|
|---|
| |