Gene LEUM_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1953 
Symbol 
ID4423666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1925907 
End bp1926719 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content38% 
IMG OID639675648 
ProductHAD superfamily hydrolase 
Protein accessionYP_819397 
Protein GI116619026 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGA TAAAAATTGT GTCTATCGAT ATTGACGGCA CATTGATTAA CGATGAGCGT 
CAAATTCCGT TAGATGTAAA ATCTGCAGTT CAACAGGCAC TTGCACAAGA TGTCAAAGTT
GTTATTACAA CCGGTCGACC ACTTCCTGGT GTTCGCAATA TATTAGACGA GTTAGGTATT
GTAGGCAGCG AACAGTATGT CATTACACAT AATGGTGGCT TAATGCAAAC TGCTGATGGC
TCTCAAATTT TGTTTCATGC TGCACTAGAT TTAGCAGAGT ATAAAGAGCT AAATACCTTT
ATGCGTGAGC AAAAAACGTA TATTCAAGCT GAGGATCAGT TCGCGGCTTA TACGACCAAT
CGTTTAATCC ATCGTTGGGC TAGTTTTGAA AATTCTCTTG TAAATTTGCC GTTACATATT
GTTAATAATG ACAATGAGCT AGAGCATGTT GAAATTATTA AGGGCATTGC CAACGCTGAA
TCTGACGATT TGGATAACGT ACAAGCGAAT GTGCCAACAA GTATTTCTGA CAAAATGTCA
GTGATTCGGT CAACTGCCAA TAACCTAGAG TTTATCAACA AAGATGCTTC GAAAGGCAAT
GCACTTGAAG CTCTGGCAAA AGCATTAAAT GTTGATATTA AAAACACAAT GGCAATTGGT
GATCAAGAAA ATGATTATTC AATGATTGAG CGCGCAGGAT TAGGTGTTGC CATGGGTAAT
GCAATTGAAA AAATTAAAAC GATAGCTGAC ATCGAAACAG CAACAAACAA TGATTCCGGT
GTAGCGCGGG CCCTAGAAGA ATATGTTCTT TAA
 
Protein sequence
MSEIKIVSID IDGTLINDER QIPLDVKSAV QQALAQDVKV VITTGRPLPG VRNILDELGI 
VGSEQYVITH NGGLMQTADG SQILFHAALD LAEYKELNTF MREQKTYIQA EDQFAAYTTN
RLIHRWASFE NSLVNLPLHI VNNDNELEHV EIIKGIANAE SDDLDNVQAN VPTSISDKMS
VIRSTANNLE FINKDASKGN ALEALAKALN VDIKNTMAIG DQENDYSMIE RAGLGVAMGN
AIEKIKTIAD IETATNNDSG VARALEEYVL