Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1953 |
Symbol | |
ID | 4423666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1925907 |
End bp | 1926719 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639675648 |
Product | HAD superfamily hydrolase |
Protein accession | YP_819397 |
Protein GI | 116619026 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAGA TAAAAATTGT GTCTATCGAT ATTGACGGCA CATTGATTAA CGATGAGCGT CAAATTCCGT TAGATGTAAA ATCTGCAGTT CAACAGGCAC TTGCACAAGA TGTCAAAGTT GTTATTACAA CCGGTCGACC ACTTCCTGGT GTTCGCAATA TATTAGACGA GTTAGGTATT GTAGGCAGCG AACAGTATGT CATTACACAT AATGGTGGCT TAATGCAAAC TGCTGATGGC TCTCAAATTT TGTTTCATGC TGCACTAGAT TTAGCAGAGT ATAAAGAGCT AAATACCTTT ATGCGTGAGC AAAAAACGTA TATTCAAGCT GAGGATCAGT TCGCGGCTTA TACGACCAAT CGTTTAATCC ATCGTTGGGC TAGTTTTGAA AATTCTCTTG TAAATTTGCC GTTACATATT GTTAATAATG ACAATGAGCT AGAGCATGTT GAAATTATTA AGGGCATTGC CAACGCTGAA TCTGACGATT TGGATAACGT ACAAGCGAAT GTGCCAACAA GTATTTCTGA CAAAATGTCA GTGATTCGGT CAACTGCCAA TAACCTAGAG TTTATCAACA AAGATGCTTC GAAAGGCAAT GCACTTGAAG CTCTGGCAAA AGCATTAAAT GTTGATATTA AAAACACAAT GGCAATTGGT GATCAAGAAA ATGATTATTC AATGATTGAG CGCGCAGGAT TAGGTGTTGC CATGGGTAAT GCAATTGAAA AAATTAAAAC GATAGCTGAC ATCGAAACAG CAACAAACAA TGATTCCGGT GTAGCGCGGG CCCTAGAAGA ATATGTTCTT TAA
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Protein sequence | MSEIKIVSID IDGTLINDER QIPLDVKSAV QQALAQDVKV VITTGRPLPG VRNILDELGI VGSEQYVITH NGGLMQTADG SQILFHAALD LAEYKELNTF MREQKTYIQA EDQFAAYTTN RLIHRWASFE NSLVNLPLHI VNNDNELEHV EIIKGIANAE SDDLDNVQAN VPTSISDKMS VIRSTANNLE FINKDASKGN ALEALAKALN VDIKNTMAIG DQENDYSMIE RAGLGVAMGN AIEKIKTIAD IETATNNDSG VARALEEYVL
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