| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1798 |
|---|
| Symbol | |
|---|
| ID | 4423510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1770098 |
|---|
| End bp | 1771693 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639675493 |
|---|
| Product | ABC-type oligopeptide transport system, periplasmic component |
|---|
| Protein accession | YP_819258 |
|---|
| Protein GI | 116618887 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00539759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AAATAGTCAT TGGTGCAGTA GCTGTTATCG CAGTTGCTGG CATTTATGCT
GCAACACGTC CGTCAAAATC AGCGAAAGGT CATACGTTAA GAGTTGCTGT TCAAAACAAC
ATCTCAACAT TGGATCCAAA TCTAGCTGAT CAAGTTGGTG CGAATTGGGC AGAAGTGCAA
ACACTTGAGG GGCTTTATAC AACATCTGCT AATGGCAAAA TTATTCCGGG GGTCGCTCAA
AAAATAGTTC AACCAACCCA AGGTAATAAG GTTTATACAA TTAAGCTCAA GAAGAACCAA
AAGTGGTCTG ATGGCTCACA AGTAACGGCA TCTGATTTTG TTAATTCAGT TAAACGTCAA
GTAAATCCAG TTACAAAATC TACTCGTGCT AACCATTTTA AAGATATTGC TGGTTATGAT
GCTGTATATA ATAATAAAGA AAACGTTAAT AAGCTTGGTA TTAGTGCACC AGACAAATAC
ACGGTGAAAA TCGAACTATC TCATCCAGTC CCTTATTTTA ATTTTATATT GGCTAACCAA
CTGTATCCAA TTAATTCAGA TAAACTAAAA GAGTATGGTA GCAAGTATGG CCAAACAGCT
AAGACGACTG TCTCAAATGG TGCTTATACG ATAAAAAAAT GGAATCAATC ATCGACGACT
TGGGAATTTG TCAAAAATAA GTATTATGCT GACGCTAAAA ATGTTCATTA TGATACCATT
AAGGCTACTC AAGTCACTGA TGCAACGCTA GCTTCTAAAC AATATCTAGC AAAGAAGGTC
GACGAAGCAG AAATATCTGG TGGTATTTTA ACGGATTTGA AGAAGAGCCA TGCTACTGAT
ATTAAATCAA CACAAAAGGG ACGTGTGGCG TTTATTGTTT GGAATGCTGA TGATAAGACA
GTCAGCAATA CAAATCTCAA GCAAGCTTTG AGTTTAGCAA TAAACCGCAA GGAGTTAACA
AAATCAGCGT TGGCTGATGG TTCAACACCT GCCAAATCAA TTGTGCCAAG TGGTGAAGTA
AAAGTAGACG GTAAAGATTT CAATGCGAAC TTGTCACTAC CTTATAACAA GGCATTGGCT
CAAAAGTATT TGAAACAAGC GCAATCAGAA TTAAATCAAC AAAAAATTAC AATTACGCTT
AATACAGCTG ATACCGATGC TTATAAGGCA TTAGGTGTTT ACTTGAAACA GAGTATTGAA
GCAACGTTGC CTGATGTTAC AATTAACCTA AAGCAATTGC CATTAAATGC TGAAATTTCC
GCCTTTGAGA GTCATGATTT TCAGGCTGGA ACTTTAACAT GGTCAACAGA TTATAATGAT
CCCATTGATT TCTTGGATAT AGCTTATTCG AAGGGGGCAA TTAATTTTAC AAATTGGACT
AATTCGGAAT ATGAGAAGAT TATCAACAAG GTTTCTGAGC AACATGAGGC CAATGACGCC
CGTTATAAGT TGGAACAACA AGCAGCCAAG TTGAATAATG ATTTAAATGG TGTTACGCCA
TTGTATCAAG TATCCAATGT TCATTTATTA CGCTCATCGG TTAAAAACTT AGATTATCCT
TTGATTGGTT ATCAGAACTA TAAGTATGCA AAGTGA
|
|---|
| Protein sequence | MNKKIVIGAV AVIAVAGIYA ATRPSKSAKG HTLRVAVQNN ISTLDPNLAD QVGANWAEVQ
TLEGLYTTSA NGKIIPGVAQ KIVQPTQGNK VYTIKLKKNQ KWSDGSQVTA SDFVNSVKRQ
VNPVTKSTRA NHFKDIAGYD AVYNNKENVN KLGISAPDKY TVKIELSHPV PYFNFILANQ
LYPINSDKLK EYGSKYGQTA KTTVSNGAYT IKKWNQSSTT WEFVKNKYYA DAKNVHYDTI
KATQVTDATL ASKQYLAKKV DEAEISGGIL TDLKKSHATD IKSTQKGRVA FIVWNADDKT
VSNTNLKQAL SLAINRKELT KSALADGSTP AKSIVPSGEV KVDGKDFNAN LSLPYNKALA
QKYLKQAQSE LNQQKITITL NTADTDAYKA LGVYLKQSIE ATLPDVTINL KQLPLNAEIS
AFESHDFQAG TLTWSTDYND PIDFLDIAYS KGAINFTNWT NSEYEKIINK VSEQHEANDA
RYKLEQQAAK LNNDLNGVTP LYQVSNVHLL RSSVKNLDYP LIGYQNYKYA K
|
|---|
| |