| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1452 |
|---|
| Symbol | |
|---|
| ID | 4423182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 1444762 |
|---|
| End bp | 1446456 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639675147 |
|---|
| Product | fibronectin-binding protein |
|---|
| Protein accession | YP_818918 |
|---|
| Protein GI | 116618547 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.429476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTAG ATGGACTATT TACGCACGCG ATTGTGCATG AACTAAATGA TTTAATTACA
GGTGGTCGCA TCACCAAGGT GCACCAACCT TATCCAAATG AAATTGTACT CGTGGTCCGT
AATAATGGGC AGAATTATCC GCTCCTACTG AGTGCTCATC CCAGCTACGC ACGTGCCCAA
ATCACACGTA TTCCCTACGA AAACCCGCAA ACTGCACCAA ACTTCGTAAT GTTTTTACGA
CGCTATTTAG AAGGCGCTAA ATTACAAAAA ATTGAGCAAG TTGAAAATGA TCGTATCATT
AATTTTTACG TTAATGCACG TAATGAATTA GGGGACATAC AAGAAATCCG CTTAACCTTA
GAGATGATGG GACGCCACTC AAACCTATTT TTAGTTCGTG AAAGTGATGC CCGTATCCTG
GAACTAATTA AACATGTTCC TGCTGACCAA AATCGTGTCC GTTCTTTGAT TCCTGGTGCA
ACTTATGTTT TGCCTCCTGC CCAGAATTTG AAGAATCCGT TTACTGCAGG GCTAGATGGT
TTAGCTCAAA TGATCCTAGA TACACCTCTC GAAGAATGGC CTAAATACAT TCAAAAAACG
TATCAGGGAT TCGGAAGAGA ATCCGCGGAA GCATTGGCTC GAGCAATTAA TCAGGCAGGT
GATCAATTAG CGCATGCGCG TGAATGGTTG GCTCATTTTG ACCATCTCGC CCCCACACTT
TTCACTTCAA AAGATGGTTC TCTTAGTTAC TCTGCCTTTG ACTGGTTGCA AGACAGCGCG
TCACAGGAAG AATTTCCAAC GTTAGGCACC ATGCTTGACG CCTATTACAT CGGAAAAGCT
GAAAGAGAAC GTGTCAACCA ACAAGCCGGT ACCCTCGTTC GGGTTGTTAA AAACGAATTG
AAAAAAAATA CGGCTAAGCG AAAAAAATTA TTAAAAACAC TTGAAGACGC TGAAAATGCT
GATGAGTTAA AAGTCAAAGG TGATTTGTTA ATTACCTACC CTCACCTCGT TCAAAAAGGA
ATGAAAAGCG TATCTATTGA AAATTATTAT GATAATAATA ATTTACTAGA AATTCCCTTA
GATCCTAAAC TAAACGGTCT GAAAAATGCT GAAAAATATT TCAACAGATA CCGTAAATTA
CGTACGGCCG TAGATTTTGT TAATGAGCAA ATTGCGTTGA CCGACGCAGA AATTGATTAT
TTTAATAATA TTGTCGCACA ATTAGATGTT GCATCTCCAA AGGACGTAGA AGATATCCGC
CTCGAATTAA CCGCTGAGGG ATACATTCGC GCCAATAAGA AAAATAAACA AAAACCAAAG
GTATCAAAAC CTGATAAATT CGAAAGTTCC GATGGTACGT TGATTGAAGT TGGTAAAAAC
AACTTGCAAA ACGAACGACT TTCATTAAAA CAAGCTGATC GTCGAGATAT TTGGTTACAC
GTCCAAAAAA TACCAGGATC ACACGTTATT ATTCATGATT CTAATCCTTC AGATACAACG
CTTATTGAGG CCGCAAAGCT CGCTGCTTAC TTCAGCAAGG CGCGTGAATC TGCCAATGTC
CCCGTCGATT ATTTACCTGC CGGAAAACTG CGCAAACCAA ATGGTTCAAA GCCAGGTTTT
GTTATTTTTG AAGGACAGCA AACACTATAT GTTACGCCCG ATGCTAGTTT AGTTTCAAAA
CTGAAAATAA AATAA
|
|---|
| Protein sequence | MPLDGLFTHA IVHELNDLIT GGRITKVHQP YPNEIVLVVR NNGQNYPLLL SAHPSYARAQ
ITRIPYENPQ TAPNFVMFLR RYLEGAKLQK IEQVENDRII NFYVNARNEL GDIQEIRLTL
EMMGRHSNLF LVRESDARIL ELIKHVPADQ NRVRSLIPGA TYVLPPAQNL KNPFTAGLDG
LAQMILDTPL EEWPKYIQKT YQGFGRESAE ALARAINQAG DQLAHAREWL AHFDHLAPTL
FTSKDGSLSY SAFDWLQDSA SQEEFPTLGT MLDAYYIGKA ERERVNQQAG TLVRVVKNEL
KKNTAKRKKL LKTLEDAENA DELKVKGDLL ITYPHLVQKG MKSVSIENYY DNNNLLEIPL
DPKLNGLKNA EKYFNRYRKL RTAVDFVNEQ IALTDAEIDY FNNIVAQLDV ASPKDVEDIR
LELTAEGYIR ANKKNKQKPK VSKPDKFESS DGTLIEVGKN NLQNERLSLK QADRRDIWLH
VQKIPGSHVI IHDSNPSDTT LIEAAKLAAY FSKARESANV PVDYLPAGKL RKPNGSKPGF
VIFEGQQTLY VTPDASLVSK LKIK
|
|---|
| |