Gene LEUM_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1392 
Symbol 
ID4423123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1377715 
End bp1378434 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID639675087 
Productglycerol uptake facilitator related permease (major Intrinsic protein family) 
Protein accessionYP_818858 
Protein GI116618487 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000178707 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACATC AATTGTTGGC TGAATTCATG GGCACTGCGC TCATGATTAT TTTCGGAGTT 
GGCGTCCACG CTGATGAAGT GTTGAATCGT ACAAAATACC ACGGTTCAGG TCATCTGTTT
TCGATTACAA CTTGGGGATT TGGAATAGCA GTTGTTTTGT TTATCTTCGG GGAAGTTTAT
ATTAACCCTG CAATGGCAAT GGCCCAACTT ATTTTAGGAA ATATTCATTT TGATTATTTC
TTAATTGTTA GTTTAGTAGA AGTATTGGGT GGTGTTTTCG GCTCAATTAT TGTCTATATT
ATGTATGCAG ATCAATTTAA ATTATCTGAA AAAGATATTG ATCCAGTAAT CGTTCGCAAT
ATTTTTTCAA CAGCGCCAGC AATTCGTAAC TTACCACGTA ATTTTTTTGT TGAAATGTTT
GCGACATTCG TATTTTTGAC AGGTATATTA GCTATTTCTG CAAAAGCGGG GGATGTTCCT
GGTATGGTTC CGCTAGCTGT GGCTTTCTTA GTTTGGGCTG TTGGTATGGG TCTAGGTGGT
ACTACTGGAT TTGCAATGAA CCTTGCTCGA GATATGGGGC CTCGTATTGC ATATACAATT
ATTCCTTGGA AAAGACGAGC CTCCAGTGAT TTCCAATACG GTATTCTTGT GCCCGGAATA
GCGCCATTTG TTGGTGCAAT TTTTGCTGCC TTATTTTCAA AGTTTTATTT AGGCCTGTGA
 
Protein sequence
MIHQLLAEFM GTALMIIFGV GVHADEVLNR TKYHGSGHLF SITTWGFGIA VVLFIFGEVY 
INPAMAMAQL ILGNIHFDYF LIVSLVEVLG GVFGSIIVYI MYADQFKLSE KDIDPVIVRN
IFSTAPAIRN LPRNFFVEMF ATFVFLTGIL AISAKAGDVP GMVPLAVAFL VWAVGMGLGG
TTGFAMNLAR DMGPRIAYTI IPWKRRASSD FQYGILVPGI APFVGAIFAA LFSKFYLGL