| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1296 |
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| Symbol | |
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| ID | 4423044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008531 |
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| Strand | - |
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| Start bp | 1284842 |
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| End bp | 1285591 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639674992 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_818766 |
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| Protein GI | 116618395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.531864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAG AAGCACAGAG ACTGCAAAAA ATTATTGCCC AAGCGGGTCT AGCGTCCCGA
CGGGGCGCAG AAGAATTGAT CATCAATGGG CGTGTCCAAG TTAATGGGCA AACTGTTACC
GAATTAGGTA CGAAAGTTAC TGCAAATGAT AAAGTACAGG TCGACGGTGC GCCAATTGAA
GGGCGTGAGA AGTTAGTTTA TTACCTGTTA AATAAGCCTC GTGGGGTTGT GACAACCAAT
GATGATGAAA AAGGTCGTCG TACGGTATTG GATATTTTAG AGGATGTGGA TCAACGTGTT
TATCCAGTTG GCCGTCTAGA TTATGATACA ACTGGTGTTT TGTTATTAAC AAATGATGGT
GTAGTGGCTA ATCAATTAAT GCATCCTAAA ACTAAAGTCG ATAAGACTTA TGTTGCAAAG
GTTGAAGGCA TTGCAACCGA AGAAAAGCTA GCTCCTTTGA AACGTGGAGT GGTCCTAAAA
GGACGTAAAA CTGCGCCAGC TCGTGTTTCC ATTGAAAGAA TTGAGCCGAC AAAAAGAACA
AGTATGGTCC GTCTAACTAT TCATGAAGGC CGTAATCATC AGGTCAAAAA CATGCTCGCA
AAGGTTGGCC TACCAGTGCA AAAGCTTAAG CGTGAGCAGT ATGCCTTTTT TGATGTCACT
GGTCTACAGC CGGGCGAGTA TCGTAAATTA ACAAGCGTAG AGATCAAACG CTTAAAGGCA
CAAGATTACA AATTGTTGCG TCGTAAGTAA
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| Protein sequence | MSEEAQRLQK IIAQAGLASR RGAEELIING RVQVNGQTVT ELGTKVTAND KVQVDGAPIE
GREKLVYYLL NKPRGVVTTN DDEKGRRTVL DILEDVDQRV YPVGRLDYDT TGVLLLTNDG
VVANQLMHPK TKVDKTYVAK VEGIATEEKL APLKRGVVLK GRKTAPARVS IERIEPTKRT
SMVRLTIHEG RNHQVKNMLA KVGLPVQKLK REQYAFFDVT GLQPGEYRKL TSVEIKRLKA
QDYKLLRRK
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