Gene LEUM_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1162 
Symbol 
ID4422924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1158168 
End bp1158968 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content39% 
IMG OID639674859 
Productshikimate kinase / chorismate mutase 
Protein accessionYP_818633 
Protein GI116618262 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG AACCAGATAC ATTAATGCTT ATTGGGTTTA TGGGTGCTGG GAAAACGACT 
GTGGGTAAGG AAATTGCTCG GCAACATCAT TCAAAGTTCG TAGATATTGA TTCTGAAATT
GAACGTGCTG CCGGTAAATC AATCGCAGAA ATTTTTGAAG AACGTGGCGA AGCCGGCTTC
CGTGAGTTAG AAACCAAAGT TTTAAATAAT GTGCAAACAT TTGATGGTGT TGTTGCCACG
GGCGGGGGTG TAGTGGAACG ACCAGAAAAC TTAGAAATTC TGCGCCATTC TCCAGCGACA
ATTATTTATT TACATGGCAA TTTAGAAAGT ACTATTGGCC GCTTAATTCT TGAAGGACAG
CGCCCGTTAC TTCAAGAAAA ATCGACGGCG GAATTCTTTG CATTATGGCA GGAACGTGAC
CCAAAGTACG AAGAAGTTGC CAATTTCACC GTAGAAACAG TTGGTAAAAC ACCGGCGCGT
ATTGCAGCTG AGATTATTGC CTTATTTAGC GCTAATGAGG ATGAACTAGC ACTACTACAA
TTGCGTTCAC AGATAGATGC ATTTGATCGT CAAATTTTTA AAATTATTTC GGAACGTTTT
CAGATTGTTG AAGCAGTGGC TCGTTATAAA GAAAAATTTG GTATACCAAC GATTCAACAG
GATCGTATGT TAAAGTTACG TAAGGAATTG AAATCAGATT TTAGTACTTC TGTAGATATC
ACAGATGACA TGATTGATGG TATTATGACC ATTTTGATGC AGGCTGCCAT TGACAAAGAG
AATAGGCAAT TAAATAGGTG A
 
Protein sequence
MIKEPDTLML IGFMGAGKTT VGKEIARQHH SKFVDIDSEI ERAAGKSIAE IFEERGEAGF 
RELETKVLNN VQTFDGVVAT GGGVVERPEN LEILRHSPAT IIYLHGNLES TIGRLILEGQ
RPLLQEKSTA EFFALWQERD PKYEEVANFT VETVGKTPAR IAAEIIALFS ANEDELALLQ
LRSQIDAFDR QIFKIISERF QIVEAVARYK EKFGIPTIQQ DRMLKLRKEL KSDFSTSVDI
TDDMIDGIMT ILMQAAIDKE NRQLNR