| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0874 |
|---|
| Symbol | |
|---|
| ID | 4422671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 866650 |
|---|
| End bp | 867849 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639674581 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_818355 |
|---|
| Protein GI | 116617984 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAG ATAAATATTC ATCAAATATG TTTAAACTAG CATTCTTATC AATTTCATTA
TTATTGACTT CAACTGCGTC AATTTCAATT ACAATTCCAA AAATGCAACA AACATTTGCC
AATCAAAGTG CAACTGCTGT TGAAGCGTTA GTTACGGCAT CTAATATTAC GGTTATGATT
TTCGTGCTAC TGAGCCCTTT TATTGTAAGA GTTTTTGGAA CTAGAAAAAC AGTTTTAACT
GGCTTATTCT TGGCAGGAGT TTCAGGTGTA GTGCCTATGT TCTCTGATAA CTATTTTCTT
GTATATATTT CTCGATTGGT TTTAGGTGCT GGCTTGGGAA TGTTTAACTC ATTAGCTGTC
AGTTTGATTA ATGACTTTTG GAGTGGAGAT ACACGCAATA AAATGCTAGG TTTTCAAAGT
GCTGTTCAAA GTGTAGGTCA AACTGTAACA ACATTTATTG CAGGAATTTT GGTTAATTAC
AATTGGCATT ATTCGTATAG TATTTACTTC TTAGCATTAG TTTCGTTCAT TCTGTTTTTG
GTTTATGTAC CAGATACGAC TACTAAGGAT GACTTAGTCA CAAATGAAGT GGTTGAAAAA
CCTAAACAAA GTATTAATAG TTATGTTTTG TTTTCATCGT TTGGTTTGCT GATCTCGTTT
GCGTTATTAA TGGCTGTATT CCTAAAGTCA GCTGGATTTG TTGTTGAAGA AAAATTTGAA
AATGCTTCGT TTATTGGAAC GGCATTATCA GTCTATACTT TGGTCGGATT TTTAGGTAGT
TTGCTCTATG GCTATATTGT GAAAATAACG AAGCAATATA CTTTCTCATT GAGTTATGCG
ATTATTGGCA TATCTTTCTT GATAGTTGCA CTAGCACCTA ACATGTTCGT CATTACTCTG
GGTATGGCTA TTGGTGGTAT TGGCGGATCG GTATTTCTAC CGATAGCATT TGGTACAATC
TTGGAAAAAG CGCCAGCAAA TTCAGGAAAT TTGGCGATTT CTATCGCTAT GGTTGGTACA
AACTTAGGTA CCTATTTATC GCCATATTTG CTAGCAACAT TAGGTAATTT ATTTGGTAAC
AATACTTCTA AATTCTCAAT CATTATTGCA GGCGTATTAA TGCTTGTGTT AGCTGTATTT
TATTTCTTCA TAAGGAACAT ATTTAAGCAA GCTAATGAGG TGGGAGAACT ACAAAATTAG
|
|---|
| Protein sequence | MIKDKYSSNM FKLAFLSISL LLTSTASISI TIPKMQQTFA NQSATAVEAL VTASNITVMI
FVLLSPFIVR VFGTRKTVLT GLFLAGVSGV VPMFSDNYFL VYISRLVLGA GLGMFNSLAV
SLINDFWSGD TRNKMLGFQS AVQSVGQTVT TFIAGILVNY NWHYSYSIYF LALVSFILFL
VYVPDTTTKD DLVTNEVVEK PKQSINSYVL FSSFGLLISF ALLMAVFLKS AGFVVEEKFE
NASFIGTALS VYTLVGFLGS LLYGYIVKIT KQYTFSLSYA IIGISFLIVA LAPNMFVITL
GMAIGGIGGS VFLPIAFGTI LEKAPANSGN LAISIAMVGT NLGTYLSPYL LATLGNLFGN
NTSKFSIIIA GVLMLVLAVF YFFIRNIFKQ ANEVGELQN
|
|---|
| |