Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0838 |
Symbol | |
ID | 4423962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 825439 |
End bp | 826353 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639674545 |
Product | LysR family transcriptional regulator |
Protein accession | YP_818319 |
Protein GI | 116617948 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00258172 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT GGCAACTGCA AATTTTAACC CACCTAGCCG AACTAGGAAC AATGAATCGA GTTGCTGAGG CTTTATTTGT TAGTCCTGCA ACAATATCAC AGCAATTAAA AGACCTTGAA GACGATTTAG AATTAACGCT GATTGAAAAA CAAGGACGGA AAGTTTATCT GAACCAAACT GGACAAGAAC TAGTGGAGAG AGCCCAGCCA GTTTTATCTG AATTAGAAAC GATCGAAAAT GATTTTAAAA CACGACAAAG TGAAATTACT GGCATTGTTA GAATTGCAAC TTTCACCAGC GCATTAAATT CTATACTTAT TCCTGTCATA AAAAAGATTA ATCAAACTTT TCCAAGTATA GAATGCAGAA TATATGAAGA AGAACCCGAC CAAAGCCTAT TAGGACTTCG GTCACACAAA TTTGATATTG TTTTAACCGG TTATTTTGAA AAAAAGGTCA CTTTTCCCAA TTCAGACATC ATATCGACCA ATATTGGCGA AGATAAATTA TTAGTAGTCT CAAGTAAAGA CGATAAAAGT ATTTTCCCAA TTAAGCACTT TTCAGACTTA GCATCAAAAA AGTGGATCAT AGAACCCAAG AATACATATT TATCCAATCA TATCATCCAA ATGTGCCGAG AAAATTTATT TGACCCTGAT GTCGTTAGTG AAATTCACAG TTATGATGCT ATAAAAAGCT TAGTGAAATC ACAACTCGGT ATCTCCATTT TGCCTTCCTT AGCACTTACT GCGGGTACTG ATATGAATGG AATTTTTATT CATGATTTCG ATATTAAAAG CAAGAGACAA ATCTACCTTT TAGAACGTAA GCCACAAAAA AGAATTCCTG CAATTAAAAT CGTGTCGCAA ATGATTACCG ATCAAGCAAC TGCAGTTTTA AAAAACTTTA ATTGA
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Protein sequence | MNIWQLQILT HLAELGTMNR VAEALFVSPA TISQQLKDLE DDLELTLIEK QGRKVYLNQT GQELVERAQP VLSELETIEN DFKTRQSEIT GIVRIATFTS ALNSILIPVI KKINQTFPSI ECRIYEEEPD QSLLGLRSHK FDIVLTGYFE KKVTFPNSDI ISTNIGEDKL LVVSSKDDKS IFPIKHFSDL ASKKWIIEPK NTYLSNHIIQ MCRENLFDPD VVSEIHSYDA IKSLVKSQLG ISILPSLALT AGTDMNGIFI HDFDIKSKRQ IYLLERKPQK RIPAIKIVSQ MITDQATAVL KNFN
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