Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0714 |
Symbol | |
ID | 4422547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 687200 |
End bp | 688195 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639674422 |
Product | sortase (surface protein transpeptidase) |
Protein accession | YP_818197 |
Protein GI | 116617826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0029312 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATAA AATTGCCTTC AGTATTAGCA GTGGCGTCTA GTGGCGACAT GACAGTATGG CAGATCATGC AAAAAATAGG GATATATGTT GCAGTTTTTG TGATGATCTT TTTGTTAGTT GCTGCTAGTC AACTCGTAAT TTCTAGACTG CGTCATAAGA AGTTTAGTCA TCATCATTTG TTTTATGATG CACTGTTTGT TACAAGTTTC ATCTCGTTGC TTGTCCTTGG AGGTTCTTAC TTATACCAAA AAAATGTGGC GGGTATCAAA ACAGTTATTT TGAAACCAAT TCATGAACAA GAACGCAAAA CGGCTAATAA AAAAGCATCA GAGGATACAA CTTCGCGCGC CCTGATTCGA AAAATGGTTA TGCGAAATGC AACAAAAAAT TTTGAGAAAC AAGGATTTGT ATCAATTCCA AGTACAAATA TTTTATTGCC AATTTATAAT GATGCCTATA GTGATGAAGG ACTGAACCTT GGTGCAAATT ACGCGAATAA ATCTGAAAAA GATCCGGAGG GGAAACAAAA GCCAGTTATG GGACAAGGAA ACTATGGGTT GGCAGCCCAC AATTTTAATG ATGGTCAGAC TGGATTTAGC GCGTTGCAAC AGACAACCAA TAATGATTCA CCGTATTTGC AAGATGGCAA GGTGAAGGGT TCATCATGGT TAAACGGGAA AAGCGTTTTG TTGGCTAATA GCAAGGGGAT TTACCGATAC GAAATTACTA GCCAAAATAC AGTTGCATCA ACAGAGGTAT CAGTGTTAAA CCCAACTAAG AAAGCACAGT TAACAATTAT TAGTTGCCTT TTCCCATCAA CGGCATATCG AATTATTACA CATGCTGAAT TGAAAAAAAC ATATACGTGG CGTAATGCAC CCGAAAAATT GGTTAGTGAA TTTAATTTGA AAGTACGCAA TACTAATGCC CGTGTGAGTT GGTGGAATCC AGGAATAGAA GAAGGCGCCA ATGGTGATGC TGGTGGAACA AAATAA
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Protein sequence | MMIKLPSVLA VASSGDMTVW QIMQKIGIYV AVFVMIFLLV AASQLVISRL RHKKFSHHHL FYDALFVTSF ISLLVLGGSY LYQKNVAGIK TVILKPIHEQ ERKTANKKAS EDTTSRALIR KMVMRNATKN FEKQGFVSIP STNILLPIYN DAYSDEGLNL GANYANKSEK DPEGKQKPVM GQGNYGLAAH NFNDGQTGFS ALQQTTNNDS PYLQDGKVKG SSWLNGKSVL LANSKGIYRY EITSQNTVAS TEVSVLNPTK KAQLTIISCL FPSTAYRIIT HAELKKTYTW RNAPEKLVSE FNLKVRNTNA RVSWWNPGIE EGANGDAGGT K
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