| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0667 |
|---|
| Symbol | |
|---|
| ID | 4422500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 635800 |
|---|
| End bp | 637092 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639674375 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_818150 |
|---|
| Protein GI | 116617779 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00422384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTATC CAATAAATGA AAAGCAACAT CTGACAGTTG ATGGTGTTGA TACAATTGAA
CTGGCAAAGA CATATGGCAC GCCGTTAGCA GTTTACGATG TAACACTTAT TCGTAAGACA
ATGAGAGCGT TTAAGCGTAT CTTTGAACAA GAAAATGTCC CATATGTAGT GAGTTATGCT
GGTAAAGCTT TTGCTACTAA AGCAATTTAT CAGGTGGCAG CTCAAGAAAA TATTCACGCT
GATGTCGTGT CTGGTGGGGA ATTATACACA GCAATTAAAG CTGATTTTCC AACTCAGCAT
CTTAGTTTTA ATGGTAATAA TAAGAGTTAT GATGAACTTG TGATGGCCGT TGAAAATGGT
GTGGGAACAA TTATTGTTGA TAATTTTCTT GAGTTACAGC TACTGTCAGA AATTACGGCG
GAAAAAAATG TTATTCAAGA TATTTTACTA CGTATTTCAC CAGGAATTTC AGCTCATACT
CATGAATTTA TTAGTACTGG TCAACAAGAT AGTAAATTTG GCTTTGATTT ACAAACAGGT
CAAGCGAAGC AGGCCTATGA TATTGCAATA AAAGATAACC ATCTTCATTT GCGTGGCTTA
CATGCGCATA TTGGATCTCA AATATTTGAT GTGACTGGAT TTGAGAAAAA TGCAGCACTA
TTAGCAGATA CTGCTTACTC ATGGGGATGG CAACCAGAAG TCATTAATAC TGGCGGTGGA
TTTGGTATTC GTTATACTGA TGAGGATCAA CCTTTGCCAG AAAACGAGTT TGCGGATGCT
ATTATCCGTG TTTTGAAAGA AAAGGCTACA CAGTACGATT GGGCAATGCC AGAAATATGG
ATTGAACCTG GTCGTTCGAT TGTCGGACCA GCCGGACAAA CCCTATATAC AGTTGGGTCG
CGTAAGGATA TTCCAGGAAT TAGAAATTAC TTGGCTGTAG ATGGTGGTAT GGGAGATAAT
ATTCGTCCAG CACTTTATCA AGCAAATTAC GAAGCGGTTT TAGCCAATCA ACCAAATGCT
AAAAGTGAAG AAATTGTGCG GATTGCTGGT AAATATTGTG AGTCAGGTGA CGTATTGGTT
TGGCAGGAAG AATTACCGGC GACAAAACCT GGTGACATTT TATCTGTGCT TGCAACAGGT
GCGTACGGGT ATGCAATGGC TTCAAATTAT AACCGAAATC CACGACCGGC CGTTGTCTTC
GTGGAAAATG GTCAACATCA AGTCGTTGTT GAACGTGAAA CTTTTGAACA CATGATCAGT
TTAGATCAGG ATTATACTCT AGGAGATAAA TAA
|
|---|
| Protein sequence | MTYPINEKQH LTVDGVDTIE LAKTYGTPLA VYDVTLIRKT MRAFKRIFEQ ENVPYVVSYA
GKAFATKAIY QVAAQENIHA DVVSGGELYT AIKADFPTQH LSFNGNNKSY DELVMAVENG
VGTIIVDNFL ELQLLSEITA EKNVIQDILL RISPGISAHT HEFISTGQQD SKFGFDLQTG
QAKQAYDIAI KDNHLHLRGL HAHIGSQIFD VTGFEKNAAL LADTAYSWGW QPEVINTGGG
FGIRYTDEDQ PLPENEFADA IIRVLKEKAT QYDWAMPEIW IEPGRSIVGP AGQTLYTVGS
RKDIPGIRNY LAVDGGMGDN IRPALYQANY EAVLANQPNA KSEEIVRIAG KYCESGDVLV
WQEELPATKP GDILSVLATG AYGYAMASNY NRNPRPAVVF VENGQHQVVV ERETFEHMIS
LDQDYTLGDK
|
|---|
| |