Gene LEUM_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0643 
Symbol 
ID4422476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp609491 
End bp610954 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content43% 
IMG OID639674353 
Productcell wall-associated hydrolase 
Protein accessionYP_818129 
Protein GI116617758 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0011775 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGAC TGGATAAAAA AGTAGTAGCT TCAGGACTGA GTTTATTAGG TCTAGTAGGC 
GTTGGCTCGG GTATCGCCCA TGCTGATGAT GTTAAAAGCA CTGTCAACAA GGCTGTTAAT
TCTGTTGCCG AAGCTGCTGG ACTAATTGAT AACAAAACGG TTAATCTCAC TCAAAAGAGT
CTAACAATAC CAAAAGATAA AGTAGCTCAT ATTGAGACAC CAGCTGAGAA AAAAGTTTCC
CAAAAAGCCA CTACTAAATT AACATCATAT AAAGTAAAGG CTGGAGATTC TCTTTGGTCG
ATTGCTCATA ATCATAATTT GAATGTAGAT GATCTCGTGA GTGAGAATAA TAATTCTGAT
TTGATATCAG TAGGGCAAAC ATTAAACTTG CCAACTAGTG TTGGCGCCGA TACACAAACA
ACAGTGGCTG ATCAATCACC AACAGACATT AATAAAAGTA CTGATTCCTA CGCTGACTCG
TTGCAAACTG CCGCTAGCGC ACCTGTTTCA GAGGTGTCAG CAGCTGGTAA CGTAGAATCA
ACGGAATCTT CAGTCACTTC TAGTACTTCC AGTCAAGATT CGTTGGCCTC GAGCTCAGCA
GCTGAAAGCT CAGTATCTTC GACTCCATCA AGTGAAGAAT CAACGTTGGC AAGCACCGCA
GATTCTAGTG TGTCAAGTGG AGAATCAGCG CCATCAAGTT CAGTGACAGA GAGTTCGTCA
GTCTCGAGCG GATCAGATGA AGAAACAAGT TCAGCGACGG AGGCCACCTC TTTAACAACG
TCTAGCACGG CAGATGTAGT GTCAGAAACG CAAAACACAT CAGGCAATAC TAGTTTGCAA
AGTAGTGAGA CAATAGCTGC AAGTGCTGCA AGTGACGCCA CAGCTTATAC GAGTTCTTCA
GATTCAACTG CAGCAGATGC TTCAGCCAAC ATCAATAGTT CTTACGGTGC AGCTGCTGTT
TCAAGTTCCG ATTCGAGTGC TGGACAACAG TATAATCAGC TATCTTCAAC TACGAACAGC
AATGGTAGTT TAGTCAATCT TTCTACTGGG TCTGTCAGTC AAATAGTAAA TTCTAATACA
ACACAATCTA TGTCTGGAAA TTCTGCCGCA ATTATTGCGC TAGCGCAACA ATTGGTAGCA
CAAAATATTC CTTATGTTTG GGGTGGAGGA ACGCCTTCAA CTGGGTTTGA TTGCTCTGGA
TTAGTGAGTT ATGTTTTCAA AAATGCTGCC GGCATCTCAT TACCACACTC GTCCGTTGAA
CAAGAAATGT ACACTCAAAA GAAGTCGGTT TCTCAAGCTC AACCAGGTGA CTTACTATTT
TGGGGTACGC CAGGCGCTTC ATACCATGTG GCTATTTATA TTGGCAATAA TCAGTATATT
GCCGCACCAA AGCCTGGATT GAATGTACGC GTTGAAACGA TTTCACCGAA TTTTTTGCCA
TCTTTCGCCG GCTCAATTAA GTGA
 
Protein sequence
MERLDKKVVA SGLSLLGLVG VGSGIAHADD VKSTVNKAVN SVAEAAGLID NKTVNLTQKS 
LTIPKDKVAH IETPAEKKVS QKATTKLTSY KVKAGDSLWS IAHNHNLNVD DLVSENNNSD
LISVGQTLNL PTSVGADTQT TVADQSPTDI NKSTDSYADS LQTAASAPVS EVSAAGNVES
TESSVTSSTS SQDSLASSSA AESSVSSTPS SEESTLASTA DSSVSSGESA PSSSVTESSS
VSSGSDEETS SATEATSLTT SSTADVVSET QNTSGNTSLQ SSETIAASAA SDATAYTSSS
DSTAADASAN INSSYGAAAV SSSDSSAGQQ YNQLSSTTNS NGSLVNLSTG SVSQIVNSNT
TQSMSGNSAA IIALAQQLVA QNIPYVWGGG TPSTGFDCSG LVSYVFKNAA GISLPHSSVE
QEMYTQKKSV SQAQPGDLLF WGTPGASYHV AIYIGNNQYI AAPKPGLNVR VETISPNFLP
SFAGSIK