Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0636 |
Symbol | |
ID | 4422469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 602667 |
End bp | 604610 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639674346 |
Product | polysaccharide transporter |
Protein accession | YP_818122 |
Protein GI | 116617751 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.217916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAATG ATCAACGTCC AGAAAAATTC AACGGTAATA GTCGCGTTGA TAAAACAGAT GTTGACGGTA AAACGTTAAC GGCTGATGAA ATTCTAGCAT TGGCAGGACG GCACTTACAA GAAAAACGTA ATCTGGGACC AAAAACGACA CGGAAGTCAC GTAGCCATGC TACTATGCCT CAGCCAACAG AACAAGAAAT TTTGGCTATT AAAGAGAAAA ATATTCGTGC ACGGCAAAAA ATTATAAAAA AGAAACCTAA TTTGCAGGTT CCAGAACAAC TATCTACTGC TGATAGCTCT CTAGAGAAAC AACCAACGAC AAAAGAAAGC AATCAAGCAA CATTAATTAA AGGTTCAGCG TGGTTGTCCG TTGGAAACAT GGTTTCACGC GTATTAGGCG TTGTATACTT AATTCCGTGG ATGGCCATGC TTGGTAGCTA CGGTACAAGA GCGAACGGCT TATTTAACCA AGGATATACC ATCTATGCAA TCTTTTTAGC GATAGCCACA TTTGGTATTC CTGCAGCCAT TTCAAAAGTA GTCGCGGAAT TGGCAGCTAA AAACGATGTC TACAGATCAA GGCAGTTAAC AAGGCAATCT ATGGCCTTGG GTATTGTACT AGGCATAGTG TTTGGTTTGA TTTTGTACTT TGCTGCTCCC GCTTTATCCA ATAATAATGC TGATGTTATT CCAGTACTTC ATTCCTTAGC ACCGGCGGTA GCTATTTTTC CTTTAATGTC AATGATCCGT GGCTTATTTC AAGGGCATCA ATTAATGAGT ATATCAGCCA TGTCACAGGT TGTAGAACAA ATTGCTCGGG TTATTTACAT GCTAGTAATG GCAGTTATTG TGTTAAAAGC TGACCCAGAT AATTGGACTG GTGTAGTTGT GCAATCAACT TTTGCAGCAT TTATTGGTGC CATTTTTAGT ATGTTGGTAT TAATGTGGGG ATGGGTGAAG TATCGTCATA TATTGTCCCG ACCAGTGCTT CACTCTGTAA AACACGAAAA GGCTAGAACA CTCAGTTTAG TGCTAAATAT TTTGAAAGAA TCATGGCCAT TTATCATTAT TGGCTCTGCT ATAACACTGT TTCAAGCTGT CGATCAGTAT TCATTCTTTA GCATAATGAA TCACTTTTTT TCCGTTTCTA AATCGGATTT GTTGGAAAAA TTTTCACTCT TTAGTGCAAA TCCCAATAAG CTCATAATGA TTATTGTGCC ATTTTCAACT AGTATAGCGG CGACAGCGTT ACCAATGTTA TCAGGTAGTA AAGCTGCGTT AACTTATGAA ACGATTCAAG ATCAATTAAA GCAGGTATTG AAGTTGTTCT CTTTGATTAT GTTGCCTAGT GTTTTGGGAA TGTATGCAAT TGCAGAACCT TTGTATAAAA TGTTCTATCC AATTGAGGCC TCAAACCAAG AAGGTATTTA CATGCTACAA TACTCAACAA TCTTGGCATT GGTATTTAGT TTGTTCATGT TGCTTGCATT TGTATTACAA GCTCTTTCAG AAGTTAAAAT TGTTATGAAA GCATTCTTTG TTGGCATTAT CATTAAAATC GTTTTGCAGA TTCCATTGAT ACGCTATTTT GAAGGTATGG GTGCTTTGAT GACGAGCGTG ATTGGCATGT TCATTTCAAT TCTCTATATG TTGGACTTTT TGCAAAAGGT TTATGGTGTT TCATTTAGTA TGATTGGTAA AGAACTATGG CAAATGTTTA TGGCTTCAGC CCTAATGGCT ATTGTTGCCT ATATTATCGT CTTTGCTATG GACAACTTTA TTTTCCCAAT GGATACAAAG TTCTCGGTTA CTGTGACAAC TTTTAGTGCG GTCTTGATTG GTGGCGCTTT GTTAATCATA ACGTATTTGC GAATGGGCTT GGGAGATGAG TTATTAGGCC GAAGAATGCG TTATATTCCT AAAATACTGC AACCAAAACG ATGA
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Protein sequence | MTNDQRPEKF NGNSRVDKTD VDGKTLTADE ILALAGRHLQ EKRNLGPKTT RKSRSHATMP QPTEQEILAI KEKNIRARQK IIKKKPNLQV PEQLSTADSS LEKQPTTKES NQATLIKGSA WLSVGNMVSR VLGVVYLIPW MAMLGSYGTR ANGLFNQGYT IYAIFLAIAT FGIPAAISKV VAELAAKNDV YRSRQLTRQS MALGIVLGIV FGLILYFAAP ALSNNNADVI PVLHSLAPAV AIFPLMSMIR GLFQGHQLMS ISAMSQVVEQ IARVIYMLVM AVIVLKADPD NWTGVVVQST FAAFIGAIFS MLVLMWGWVK YRHILSRPVL HSVKHEKART LSLVLNILKE SWPFIIIGSA ITLFQAVDQY SFFSIMNHFF SVSKSDLLEK FSLFSANPNK LIMIIVPFST SIAATALPML SGSKAALTYE TIQDQLKQVL KLFSLIMLPS VLGMYAIAEP LYKMFYPIEA SNQEGIYMLQ YSTILALVFS LFMLLAFVLQ ALSEVKIVMK AFFVGIIIKI VLQIPLIRYF EGMGALMTSV IGMFISILYM LDFLQKVYGV SFSMIGKELW QMFMASALMA IVAYIIVFAM DNFIFPMDTK FSVTVTTFSA VLIGGALLII TYLRMGLGDE LLGRRMRYIP KILQPKR
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