Gene LEUM_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0127 
Symbol 
ID4422057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp107893 
End bp108531 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content42% 
IMG OID639673840 
Producthemolysin III-like protein 
Protein accessionYP_817651 
Protein GI116617280 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.07276e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAT CAAGACGTTT TCAAATTGTT TATGAAGTGC TCAACGCGGT CACGCACGGA 
TTTGGGTTCA TTTTAGCTGT GATTGCCGGT GTAATGTTGA TGATTCATGT GTTGAGCAAA
CCAGTTACCG CATTGACTTT AACTGCGGTT ATCATCTATA TTAGTACGGT TGGTTTTTTT
CTACTTGCCT CAACGCTATT TCATTCGCTC GTGTTTACCC GTGCGGCAAA AATCTTTCAA
TTTTTTGACC ATGCAGGCAT ATATCTTGTT ATCTTAGGTA GTTACACGCC CTACACATGG
TTATTGATCA AGGGCTGGGT TGGCTGGACT ATTTGGGGCG CTATTTTAGC AATGACGATT
GCCGGATTTG TTTATGATTT ATTTTTTGTT GGACGATGGC CTTGGGTATC GGTGACGATT
TATCTGGTCA TGGGGTGGTT GATTATTCTA GCAATGCCTA TTCTTTGGGG CGTTTTGTCG
CATACCGCCT TCTGGTTACT TGTTGCTGGA GGCTTGACCT ATTCGGCGGG AACTATTTTT
TATCTTATTC CTAAAATTCC AATGGGTCAT GTTTATTGGC ATCTCTTCGT CTTAGGTGGC
GCTGGATTAA TGTTTGCTAG TATCTACATT TCTTTGTAA
 
Protein sequence
MQRSRRFQIV YEVLNAVTHG FGFILAVIAG VMLMIHVLSK PVTALTLTAV IIYISTVGFF 
LLASTLFHSL VFTRAAKIFQ FFDHAGIYLV ILGSYTPYTW LLIKGWVGWT IWGAILAMTI
AGFVYDLFFV GRWPWVSVTI YLVMGWLIIL AMPILWGVLS HTAFWLLVAG GLTYSAGTIF
YLIPKIPMGH VYWHLFVLGG AGLMFASIYI SL