Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0120 |
Symbol | |
ID | 4421978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 102506 |
End bp | 103186 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673833 |
Product | ABC-type amino acid transport system, permease component |
Protein accession | YP_817644 |
Protein GI | 116617273 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT TGACAATTAG CACTATCTTT GCGGGGAATA ACTTATTCAG GTTATTGAAT GGATTGGTTG TCACTATTGA AATATCATTA ATATCGATTA TTTTGGGCAC AATATTAGGC GTCATACTGG GATCGTTGTG GTCTGCCGCC GGCACACTGA TTAAACCCAT TTTCAAAGCA TATCTTGAGA TATTTAGAGT GGTACCAACC ATTCCATTAT TATTTTTATT TTATTATATT TTTCCGCGTA ATTTAAATAT CAATTTATCA GCCATGCAAG TGAGTATTTT AGTTTTTAGT TTATGGTTTG CAGCTGAGCT TTCTGATATT GTTCGAGGCG CGATACAATC AATTTCTAAA AGTCAGCGTG AAAATGCCTA TTCGATAGGG TTAACAACGT TGCAAACCTA CAGGTATGTA TTAATTCCAC AAAGCGTTCC CAATATTCTA CCAGCTTTTA TTAACTTAAG TTCTAGAATT ATTAAAACGA CGTCAATTTT ACTTTTAATA TCCGTTACCG ATGTTATTAC AGTAGGGCAA CAGATTATTG AGGCGAACGC CCAAGATACT GCTGTTCCAC TTTTGATTTA TGGTTTTATT GCGTTGTTAT ATTTCTTGAT TAATTATTTA TTAAGTCATT TTAGTCGCAG GTTAGAAAGG AAATATCGAA AATATGAGTG A
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Protein sequence | MQILTISTIF AGNNLFRLLN GLVVTIEISL ISIILGTILG VILGSLWSAA GTLIKPIFKA YLEIFRVVPT IPLLFLFYYI FPRNLNINLS AMQVSILVFS LWFAAELSDI VRGAIQSISK SQRENAYSIG LTTLQTYRYV LIPQSVPNIL PAFINLSSRI IKTTSILLLI SVTDVITVGQ QIIEANAQDT AVPLLIYGFI ALLYFLINYL LSHFSRRLER KYRKYE
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