Gene LEUM_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0112 
Symbol 
ID4421970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp95281 
End bp96096 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content37% 
IMG OID639673825 
ProductABC-type amino acid transport system, periplasmic component 
Protein accessionYP_817636 
Protein GI116617265 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GGAACCCAAT CATTAGTGTG ATTATCGTCG TAGTATTAAT TGCTATTGTT 
GCCGTAGGCG GTTTGATTTA TCAAACCAAT AACCATAAAA ACGAAGCCAA AGGAGATACT
AAACAAAAAG TGCTTAAAAT TGGCGCGACG GGAACCAGCT TCCCAACAGC ATACAAATCA
AAAGGAAAAT TAGTTGGTTT TGATGTTGAC GTAATCAATG CAGCAGCAAA AAAAGCAGGA
TACAAAGTAC AGTGGGTCAC TGGTGAATTC GATGGTTTGC TGGGGCAACT AGATAACAAT
AAGCTTGACA CTGTGGCTAA TGATGTTGCT ATTACACCAG AAAGAAAAGC TAAGTACAAG
TTTAGTAATA TTTATAACAA AGAAGAAACA ACAGTAGCAG TTAACAAAGA TTCTGATTAT
AATACATTAA ATGATTTAGA AGGCAAGACA ATTGCTGGCG CATCTGCCTC AAACAATACC
AAAAATTTGC AAGACTATAA TAGTAAAATC AAATTTAAGT TATATGATGC CCGTGACGTC
ACTTTTCAAG CTTTACTAGC AGGGCACGTT GATGGTGTGG TTAACACACG TAATAATTTA
GAGGCGTTAA TCAAAGCCAA AAATTACCCT TGGAAGGTTG TGAAAGGGAG TGCAGCAACT
GTAAATATTG CCTTGCCTTT CCGTAAAGAT GATAGTGAAA GCGCAAAAAT ATTAAAGAAG
CTCAACCCAG CAATCAATAA ACTAAAGGAA GATGGGACGT TGAAAAAACT ATCCGAAAAA
TACTTCGGGT ATGACGCAAC AGCTGATTTA AAGTAA
 
Protein sequence
MKKRNPIISV IIVVVLIAIV AVGGLIYQTN NHKNEAKGDT KQKVLKIGAT GTSFPTAYKS 
KGKLVGFDVD VINAAAKKAG YKVQWVTGEF DGLLGQLDNN KLDTVANDVA ITPERKAKYK
FSNIYNKEET TVAVNKDSDY NTLNDLEGKT IAGASASNNT KNLQDYNSKI KFKLYDARDV
TFQALLAGHV DGVVNTRNNL EALIKAKNYP WKVVKGSAAT VNIALPFRKD DSESAKILKK
LNPAINKLKE DGTLKKLSEK YFGYDATADL K