| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0101 |
|---|
| Symbol | |
|---|
| ID | 4421942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 83851 |
|---|
| End bp | 85953 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639673815 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_817626 |
|---|
| Protein GI | 116617255 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAATTAA AAAGAATGCA AAAAACAGAT TGGTATTTAG TCGGTATTTT AATACTAAGT
GCCTTTCTGT ATGGTTGGGG TATATGGGAT GCTGGTAGTG CTAATAGCTA CTATACGGCG
GCTATTACCT CGATGACAAA AAGTTGGTCG AATTTTTGGT ACGGCGCTTT TGATCCAGCA
GGATTTATTA CTGTTGACAA ACCGCCAGTT GCATTATGGC TAATGGCCAT ATCAGCTAAA
ATATTTGGTG TACATGGCTG GTCGGTTGTT TTACCAAGTG TTTTGTCGGG TATAGGATCT
GTTTACTTAA TGTATAAATT ATTAGCACCA AAGTTTGGTT TATTGGCCGG AAGAATTGGG
TCCTTGATTT TGACATTAAC GCCAACGGTG GTTGCTAATA GTCGCACAAA TAATATGGAT
GCTATACTGG TATTTTTCTT GCTTTTAGCT GTATATATTT TACAAAAAGC AGTCGCTAAG
AAAAATATTT GGCTAGTCAT TGTCAGTTTT GGTTTGATTG GTGTGGGCTT TAACATCAAA
ATGTTACAAG CCTTCATGAT TTTACCAGCA ATGCTTGTTT ATTATTGGGT AGCAATCAAA
CTACCGTGGA AAAAGAAAAT TGCTTGGTTA GTTGTTGGTA TGGCTTCCTT ATCGATTTTT
ACAGTAGCCT ACCCGTTGGC AGTTGATTCT GTTGACCAAT CTAGTCGACC ATATATTGGT
AGCTCACAAA CGAATTCATT AATGGAGCTA GCATTTGGAT ATAACGGTAC CGAAAGATTG
TTAGGACAAT CAACAGGAAC CGGCGGTGCT TTCCCTGGCA TGGGAAGTAC CAAAAAATCA
ACAGGAACTC AAAAAAATAA CGGTGCTCCG AGTGGTAAAA AGCCGAGCGG GTCAGCGTCA
ACTGGTAAAA TGACCGGACA GGCACCGACC GGACAACAAA ACGGTGGTAA AGCGCCAACT
GGCACGCCAC CAAACCAATC TACAAATAAA AACGCAAACC AGGCTAAAGG CAAAGCACCT
GGTCAGTCAG GAAAAATGAC CAGACAAGCA CAAGGTGGCC AGGGTGGCGG TAACAGTGCA
TTTGCTATTG GATCAGCTGG ACCATTTAGG CTTTTCCAAT CAGATTTGGG TTCACAAATT
GGTTGGTATC TGCCACTTGC AATTCTTGGA CTTATTGCTG GTTGGTTTGG ATTTAGAAAA
CGTGGTGCTA AATGGCACCA TGTTTCTGAG GAACAATCCG AGGTTCTGCT CTGGGCGGGC
TGGTTCGTTC CAGTCTATGG ATTTTTCTCA GTTGCTAGCT TCTTTCACCC ATATTACACA
ATTATGCTAG CCCCTGCGAT TGCTGCACTG ACAGCAATTG GCGTAGCGGC GGTTGTGAAA
ATGTCTGCTC AAAGCAATAA AGAATCAATG ATCGCACGAA TAGTGGTCAG TGTTGCCGTA
TTAACAACGC TTCTACTGCA AGCGTACTAT GTATGGTCAT ATTATCAAAT TATCAGCATT
ATCTTGATTA TTGTAGCAAT TGGCTTATCT ATCTGGTGGT TATTGCCTAG ACAAATCAAT
AACAAAATAA AAATTGTCTT GTCGGCCATT AGTATCTTAC TAATGGCAGG CTGGTGGTCG
TTAACACCAA CATTGTCGCA CAATTCTGCA GCAATACCAG CCGCTAGTCC TTCCCTGCTA
AGTCAAACCG GAAGCAGTGA TATGGGCGGG GAAGTCAATA ATCAATTATT GAGCTACACT
AAGAAGCATC AAGGCAATGC TAAATACTTA TTTGCTACAA CAGATTCTAA TTCAGCATCT
GGATATATTA TCAAATCAGG CAAAGCAGTT ATGGCTATAG GTGGTTATAA CGGTACTGAT
CCAACGATGT CTCTATCCGA GTTTAAGAAG CTAGTCAAGT CGGGACAACT TAAATACTTC
GTTATGGGTA ATAATAGTAA AACTTCAAGT GGTCAAATTA GTAAAATACT AACTTGGGTT
AAAAAGAATG GTACTAAGGT CACATATAGT TCTAGTACGT CAAATCAAAG TTCCCCAACG
CAACAAATGG GTGGACAATC ACAAAGTACA ACGCTATATG ATCTATCAAA TATATACGAA
TAA
|
|---|
| Protein sequence | MQLKRMQKTD WYLVGILILS AFLYGWGIWD AGSANSYYTA AITSMTKSWS NFWYGAFDPA
GFITVDKPPV ALWLMAISAK IFGVHGWSVV LPSVLSGIGS VYLMYKLLAP KFGLLAGRIG
SLILTLTPTV VANSRTNNMD AILVFFLLLA VYILQKAVAK KNIWLVIVSF GLIGVGFNIK
MLQAFMILPA MLVYYWVAIK LPWKKKIAWL VVGMASLSIF TVAYPLAVDS VDQSSRPYIG
SSQTNSLMEL AFGYNGTERL LGQSTGTGGA FPGMGSTKKS TGTQKNNGAP SGKKPSGSAS
TGKMTGQAPT GQQNGGKAPT GTPPNQSTNK NANQAKGKAP GQSGKMTRQA QGGQGGGNSA
FAIGSAGPFR LFQSDLGSQI GWYLPLAILG LIAGWFGFRK RGAKWHHVSE EQSEVLLWAG
WFVPVYGFFS VASFFHPYYT IMLAPAIAAL TAIGVAAVVK MSAQSNKESM IARIVVSVAV
LTTLLLQAYY VWSYYQIISI ILIIVAIGLS IWWLLPRQIN NKIKIVLSAI SILLMAGWWS
LTPTLSHNSA AIPAASPSLL SQTGSSDMGG EVNNQLLSYT KKHQGNAKYL FATTDSNSAS
GYIIKSGKAV MAIGGYNGTD PTMSLSEFKK LVKSGQLKYF VMGNNSKTSS GQISKILTWV
KKNGTKVTYS SSTSNQSSPT QQMGGQSQST TLYDLSNIYE
|
|---|
| |