Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0066 |
Symbol | |
ID | 4422019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 55344 |
End bp | 56549 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673780 |
Product | major facilitator superfamily permease |
Protein accession | YP_817591 |
Protein GI | 116617220 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.110022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCGAT TAATGCAAAA TAAAGATCAG AGGAATAATA TTAGTGTACG TATTGCTATT TATTTGACCT ATATTGTACA GGGGTTTGCT TTAATTATTT TAGCGCAGAC CGTGCAACAA TTAAGTGAAT TGTGGAATGC CTCAATTGCT GGTACAACTG CTGTCGTTTC AGCAATTGGT ATTGGAAAGC TAATTGCTTA TCCAATTTTG GGAGAATTGT CTGATCACGT TGATAGAAAA AAATTATTAA TGATGGCTAT GTTCATGTAT TTAATATTTT TTTCTATTTT ACCATTAACA AAGAATATAT TTTTCGCCGT TGTCATAACC ACGCTGGCAG GACTAGCCAA CGCGGCATTA GATTCTGTGG CCTACCCCAC ATTATTAGAA ATGAATCATG GTAAATCCAG TGGGAATGTA CTCATTAAAG CAATGATTTC ATTGGGTGAA GGGATATTAC CGATTATTTT AGTCATGTTG ATTAATCAAC ATATTTGGTT TGGTTGGTTA TTTTGGGTTG CCACGGCTAT TCTGGTAGTA AACTTAATCA TCATGACTTC AATTAATGCA GCTGGTTTTT ATACTATTCG TACCTCAAAA GGGGGCAAGA GAGCTACCAA TAAAGGTACA TGGCATTGGA ATATTACAAA AATATTATTT ATGATTTATG GATTCAGTGC AATGTGGGTG ATGATTCATT TTACTCAGTG GGTCACGCGA TATTTTCACA TTGTACAATC ATTTTCAACG GTTAGTTCGC ATGTACTAAT GTCTTTTTAC AGTATTGGCT CACTCATGGG CGTGGGTACT TTGTTTTTAT TGACCAACCG GGGATGGATC AGCGAAAAGA TATTGTTAAT GATCACAGCG ATAGGGACAA TAGTTGGATT AGTTATTGTC GTTTTGAGCC AAGAAACAAT CAGTGCTAGT TTCGGTTGCT TTATTTTTGG TTTTTCAGCC GCAGGAGGAG CGCTACAGTT GGGATTGAGT CAATTAATAG CCTCAGATCC AAAGTTTTCA GGCCGTTTGA CCGGTCTCTA TTTTTTCTTT GGTAGCATTG CATTTTTTGT TATGCCAATT GTCACTGGTC ACTTTGCCGC ACAACATTTG CAAGGTGTGA TGTTGAGTTT GTTGGCTGTG GCTGGTTTGA ATTTGTTTAT TGTAGTCTTT AATTTTTATC ATTCGCAACA AGTGCAGAAA CAATAA
|
Protein sequence | MIRLMQNKDQ RNNISVRIAI YLTYIVQGFA LIILAQTVQQ LSELWNASIA GTTAVVSAIG IGKLIAYPIL GELSDHVDRK KLLMMAMFMY LIFFSILPLT KNIFFAVVIT TLAGLANAAL DSVAYPTLLE MNHGKSSGNV LIKAMISLGE GILPIILVML INQHIWFGWL FWVATAILVV NLIIMTSINA AGFYTIRTSK GGKRATNKGT WHWNITKILF MIYGFSAMWV MIHFTQWVTR YFHIVQSFST VSSHVLMSFY SIGSLMGVGT LFLLTNRGWI SEKILLMITA IGTIVGLVIV VLSQETISAS FGCFIFGFSA AGGALQLGLS QLIASDPKFS GRLTGLYFFF GSIAFFVMPI VTGHFAAQHL QGVMLSLLAV AGLNLFIVVF NFYHSQQVQK Q
|
| |