Gene LEUM_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0004 
SymbolrecF 
ID4421981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp3432 
End bp4556 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content40% 
IMG OID639673718 
Productrecombination protein F 
Protein accessionYP_817549 
Protein GI116617178 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACTCG AATCGTTAAA GCTCGATCAT TATCGTAATT ATTCAGATTT AACGCTGGAA 
TTCAGCTCGG GTGTGAATGT TTTTCTTGGT GAAAATGCGC AAGGAAAAAC AAACTTATTA
GAAAGTATTT ATGTATTGGC ACTTGCAAGG TCACATAGAA CCAGTAGTGA CAAAGACTTG
GTCCAATGGC AAGCAAAAGA AGCAACTATC AGTGGCCGGG TTAAACGTTC TATTAGTGAG
ACCCCGCTGT CGCTCCATTT TTCTAATAAG GGTAAAAAAG CACGGGTTAA TCATCTTGAA
CAATCAAAGC TGTCGCATTA TATCGGGCAA CTCAATGTCA TTTTGTTTGC ACCAGAAGAT
CTTGAGCTGG TTAAAGGGGC GCCAAGCGTA CGTCGCCGTT TTATTGACAT GGAGTTTGGC
CAAATGAACC CCTTGTATTT GTATAATACG ACACAATACA AGCGGATTTT AAAAGAAAGA
AATGCTTATC TTAAGCGTTT GCAACTTAAA CAGACAACGG ACACAGTATT CTTGGATGTA
TTGAGTGAAC AATTGGTTGA TGTAGGTTCA CAAATTTTAA TTGCACGTCA AGAATTTTTG
AACAAATTAG AATTGGCTGC ACAACCAATT CACGCTGAAA TATCTGATCA GCGTGAAGCT
TTGAAATTAC GATATATGAG TTCGGTTGAT TTTGCTTCAG ATGCTAGTCT TGAAGAGGTG
AAATCGGTAT TCGCTGATGC ATTGTCACGT CAGCGTTCAC GTGAAATTAT GCAAGGATCG
ACAATGGTTG GCCCTCATCG CGACGAATTA CAATTTGATG TTAATGGGAA TAATGTTGCT
ATTTTTGGTT CACAAGGACA GCAACGAACA ACGGCGTTGG CTATTAAATT AGCCGAAATT
GATTTAATGC AACAAGAAAC TGGGGAGTAT CCAGTATTGC TTCTCGATGA TGTACTTAGT
GAACTTGATG CCAGTCGGCA GACACATTTA TTATTGGCAA TTCAAGATAA GGTGCAAACA
TTTATCACTG CACCAACACT CAGCGATATT GCACGGCAAC TCATTCGAAA ACCACGTGTG
TTTCATGTGA AACAAGGAGT GATTACACTC GAAAACGACA CATAG
 
Protein sequence
MELESLKLDH YRNYSDLTLE FSSGVNVFLG ENAQGKTNLL ESIYVLALAR SHRTSSDKDL 
VQWQAKEATI SGRVKRSISE TPLSLHFSNK GKKARVNHLE QSKLSHYIGQ LNVILFAPED
LELVKGAPSV RRRFIDMEFG QMNPLYLYNT TQYKRILKER NAYLKRLQLK QTTDTVFLDV
LSEQLVDVGS QILIARQEFL NKLELAAQPI HAEISDQREA LKLRYMSSVD FASDASLEEV
KSVFADALSR QRSREIMQGS TMVGPHRDEL QFDVNGNNVA IFGSQGQQRT TALAIKLAEI
DLMQQETGEY PVLLLDDVLS ELDASRQTHL LLAIQDKVQT FITAPTLSDI ARQLIRKPRV
FHVKQGVITL ENDT