Gene LEUM_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0003 
Symbol 
ID4422966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp3004 
End bp3450 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content41% 
IMG OID639673717 
ProductS4-like RNA binding protein 
Protein accessionYP_817548 
Protein GI116617177 
COG category[S] Function unknown 
COG ID[COG2501] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02988] S4 domain protein YaaA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCA GCGTACGTAT CACAACTGAA TACATTACTT TGACACAATT ATTAAAAGAA 
GAGAACATTA TTTCATCAGG CGGCCAGGCC AAATATTATT TAATGGATTT TCCGGTGTTA
CTCAACGGAG AAACAGAAAA TCGTCGCGGT AAAAAGTTAT ACGATCATGA TGAGATTGTT
ATTGATGGCG AAACATACAC AATTGAATTA GCAGAGAATG CTGAAGAGTT GATAGCAGAA
GCTGAGACGC AAAGAGCTGA ACGTGCTATG AACGCTAAAA AAACCGTCCG TGATGATCGT
ATTAAGGCAC AAAAGGCAGC TGCAGCCAAA GCCCGTAAGG AAGCTAGATT TGCTGAATTA
CGCAAAAAAA ATCGTACTCG TGCTGGTGGA TTTGGTCGCT CGACAAACAA ACCTAAAGGA
CCCGGTTCGT GGAACTCGAA TCGTTAA
 
Protein sequence
MTTSVRITTE YITLTQLLKE ENIISSGGQA KYYLMDFPVL LNGETENRRG KKLYDHDEIV 
IDGETYTIEL AENAEELIAE AETQRAERAM NAKKTVRDDR IKAQKAAAAK ARKEARFAEL
RKKNRTRAGG FGRSTNKPKG PGSWNSNR