Gene LGAS_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1795 
Symbol 
ID4438994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand- 
Start bp1781861 
End bp1782859 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content37% 
IMG OID639673612 
Productphosphotransferase system, mannose/fructose-specific component IIA 
Protein accessionYP_815624 
Protein GI116630348 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.172068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value1.3720900000000001e-24 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAGGAA TTGTCCTAGC TAGTCACGGT GGCTTTGCTG ATGGAATTTT TCAATCTGCT 
GAGATGATTT TTGGTAAACA AGAAAATCTT GCTCATGTGA TTTTGAAGCC AGATGAAGGT 
CCTGATGATA TTAGAGCTAA GATGGAAAAG GCGGTTGCTT CTTTTGATGA TCAAGACCAA 
GTCTTGTTTT TGATCGATTT ATGGGGAGGT ACGCCATTTA ACCAAGCAAA TAATCTCGTT 
AAAGAGCATG AAGATACTTG GGCTATTGTT TCTGGTATGA ACTTACCAAT GGTTATTGAA 
GCTTTAGGTC AAAGAATGGG AAGTGATAAT GCCCATGATA TTGCCAAAGC TATTGTTAAG 
CCAGGTCGTG ATGGAATTAA GACGCAACCT GAATCTCTTA TGCCTAAAGA GACTACTGAA 
AAATCAGCTT CCAATTCTGA TGCACAACCA CAAGGTGCAA TTCCAGAAGG TACTGTTATT 
GGTGATGGTC ACATTAAATA TGTTTTGGCT AGAATCGATT CACGTCTTCT TCATGGTCAA 
GTTGCAACTG GTTGGACTAA AGCAATGAAT CCAAATCGGA TTATTGTTGT TTCAGATAAT 
GTTGCTAAGG ATAAAATTCG TAAAACAATG ATCAAGGAAG CCGCTCCAGC TGGTGTGCCT 
GCGAATGTTG TTCCAATCGA TAAAATGCTT AAAGTAGTAA AAGATCCACG ATTTGGAAAT 
ACTAAAGCAT TAATTTTATT TGAAAATCCA GAAGATGCGC TTAAAGCTAT TGAAGGTGGA 
ATGGATATCA AAGAATTGAA TATCGGTTCC ATGGCTTACA GTGATGGTAA AGTTAATGTG 
AATACTGTTT TGGCAATGGA CCAAAAAGAT ATTGACACAT ATAAGAAATT AAAAGATTTG 
GGCGTTAAAT TTGATGTCCG TAAAGTTCCT TCTGACGGTA AACAAAATAT GGATGAACTT 
TTGGAGAAAG CTCAAAAATT AGTTGATGAA AAGAAATAA
 
Protein sequence
MVGIVLASHG GFADGIFQSA EMIFGKQENL AHVILKPDEG PDDIRAKMEK AVASFDDQDQ 
VLFLIDLWGG TPFNQANNLV KEHEDTWAIV SGMNLPMVIE ALGQRMGSDN AHDIAKAIVK 
PGRDGIKTQP ESLMPKETTE KSASNSDAQP QGAIPEGTVI GDGHIKYVLA RIDSRLLHGQ 
VATGWTKAMN PNRIIVVSDN VAKDKIRKTM IKEAAPAGVP ANVVPIDKML KVVKDPRFGN 
TKALILFENP EDALKAIEGG MDIKELNIGS MAYSDGKVNV NTVLAMDQKD IDTYKKLKDL 
GVKFDVRKVP SDGKQNMDEL LEKAQKLVDE KK