Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1793 |
Symbol | |
ID | 4438992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1780078 |
End bp | 1781007 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673610 |
Product | mannose-specific PTS system component IID |
Protein accession | YP_815620 |
Protein GI | 116630346 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000964507 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 8.06003e-28 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTGAAA CTGCAAAAAA GAAATTAACT TTAAGTAAAT CAGATCGTAT TAAGGTTTGG TGGCGTTCTA CTTTCCTTCA GGGTTCATGG AACTACGAAA GAATGCAAAA CGGTGGTTGG GCATACAGTT TAATCCCAGC CTTAAGAAAA TTGTATCCAG AAAAGAAGGA TTTATCTCTT GCATTAAAGA GACACCTGGA ATTCTTTAAC ACACACCCTT ACTTAGCATC ACCTATTATT GGTGTTACTC TTGCCTTAGA AGAGGATAAG GCTAACGGTG CCGATGTTGA TAACACTGCT ATTCAAGGTG TTAAAGTTGG TATGATGGGT CCTTTAGCTG GTGTTGGTGA CCCTGTATTC TGGTACACGG TTCGTCCTAT TATTGGATCA CTAGGTGCTT CACTTGCTTT GAGTGGAAAT ATCTTAGGTC CTATCCTATT CTTTGTATTA TGGAATGTAA TTCGTATGGC ATTCTTATGG TACACTCAAG AAATGGGTTA CAAAGCTGGT ACTAAGATTA CTGAAGATGC TTCAGGTGGT TTATTACAAA AGATCACTCG TGGTGCTTCA ATGATGGGTA TGTTTGTTAT CGGTGCCTTA ATTGAACGTT GGGTAACGAT TAACTTTAAG CCAGTTGTTT CAAGTGGTCC ACTTCAAAAG GGTGCTTACA TCGATTGGAA CGCTCTTCCA AAGGGTGCAG AAGGCATTCA CAAAGCATTA TCTGAATATA ATTTAGGTAA TGGTATGGCC TTAGATAAAA TTAAGGAAAC AACTTTGCAA CAAAACTTAG ATAGTTTGAT TCCTGGTCTT GCTGCATTGC TATTAACTTT CTTATGTATG TGGCTACTAA AGAAGAAAGT TTCACCAATT GTTATTATTA TTGGTATCTT CGTTGTTGGT ATTTTAGGTC ACGTAATTGG CTTACTATAA
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Protein sequence | MTETAKKKLT LSKSDRIKVW WRSTFLQGSW NYERMQNGGW AYSLIPALRK LYPEKKDLSL ALKRHLEFFN THPYLASPII GVTLALEEDK ANGADVDNTA IQGVKVGMMG PLAGVGDPVF WYTVRPIIGS LGASLALSGN ILGPILFFVL WNVIRMAFLW YTQEMGYKAG TKITEDASGG LLQKITRGAS MMGMFVIGAL IERWVTINFK PVVSSGPLQK GAYIDWNALP KGAEGIHKAL SEYNLGNGMA LDKIKETTLQ QNLDSLIPGL AALLLTFLCM WLLKKKVSPI VIIIGIFVVG ILGHVIGLL
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