| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1778 |
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| Symbol | |
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| ID | 4439008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1762071 |
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| End bp | 1764014 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639673595 |
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| Product | sucrose PTS, EIIBCA |
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| Protein accession | YP_815592 |
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| Protein GI | 116630331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000018652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000000000675608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCACA AAAAAGTTGC TGAAACAGTT ATTGAAGCTG TTGGTCGCGA CAACTTAGTA
GCCGCTGCTC ACTGTGCTAC GCGTCTACGT TTAGTCTTAA AAGACGATAG TAAAGTAAAT
ATGAAGATGC TTGATAGCGA TCCAGATATC AAGGGGACTT TCAAAACTAA TGGTCAATTT
CAAATTATTA TTGGACCTGG AGATGTTAAC AACGTCTACG ATGAATTAAT TAAAATGACA
GGTCTATCAG AACTTTCAAC TGACGACTTA AAGAAAGTTG CTCAAAAGGA TCAAAAGTTT
AACCCAGTAA TGGCCTTTAT TAAACTTTTG TCTGACATCT TTGTTCCTAT TATTCCAGCC
TTAGTAGCTG GTGGTTTGTT AATGGCTTTG AACAACTTCT TGACTTCTCC AGGTTTGTTT
GGAGCAAAGT CAGTTGTTCA AATGGCGCCT AACGTTAAGG GATTATCTGA AATCATTCAA
GTAATGTCAG CTGCTCCATT TATTTTCATG CCTATCTTAG TTGGTATGTC TGCAGCTAAA
CGGTTTGGAG CTAACCAATT CTTAGGTGCA ACTATTGGTA TGATTATGAC CACTCCTGCT
TTAGGTGGGG CTGGTAAATA CTGGGATATC TTTGGTTTGC ATGTTTCTCA AACTAACTAC
CAATATCAAG TTATTCCGGT CTTAGTAGCT GTTTGGCTTT TGGCTTTCTT AGAAAAGAGA
TTCCACAAGT GGTTACCATC AGCAGTTGAC TTTACATTTA CACCACTTCT TTCAATTATG
ATTACTGGTT TCTTAACTTT CACAATTATT GGACCAGTCT TTAAGGGTGT GTCAGACGCA
ATTACTGCTG CAATTGTTTG GTTATATAAC ACAACGGGTG CCTTTGGTAT GGGTATCTTT
GGTTTATCTT ACTCAGCAAT TGTTACTACT GGTCTTCACC AAAGTTTCCC AGCAGTTGAA
ACTCAACTTT TAGCTGAATA TGCACGTGGT CGTGGTTCTG GTGACTTTAT CTTCGTTACT
GCATGTATGG CCAATGTTGC TCAGGGTGCT GCTACCTTTG CAGTTTACTT CTTGACTAAG
AATGAAAAAG TTAAGGGCTT AGCAAGTTCA TCTGGTGTTT CTGCATTACT TGGTATTACT
GAACCAGCAT TGTTTGGTGT TAATTTGAAG TACAAGTTCC CATTCTTCTG TGCTTTAATT
GGTGCAGGTG TAGGTGCTGC TTTTGCAGGC TTAATGCATG TTACTGCTGC TGCTCTTGGT
TCAGCTGGTT TCCTTGGTTT CTTATCAATG GTGCCAAAGA GTATTCCAAT GTGGGCACTT
TCAGTAGCAA TTAGTTTCAT TGTTGCTTTT GCTTTAACCT TTGTATACGG TAAGCGCCAC
TTCAAAGAAG ACGTAGTCGA AGAATCTGGT ACTGTTGAAT CAGCTGGTGA TCAAGTTGCA
CAACAAGAAA AGGCTGATCA AATTATCAAA GAAGATAAAG AATTACATGA TGAAGTAATT
GCTGCTCCTG TTTCAGGTAA GGCAGAAAGC TTAAAGGATG TTAAAGATCC AGTCTTTTCA
ACTGAAGCAA TGGGGAAGGG CGCTGCTATG GTTCCAAGTG AAGGAACTAT CTATTCTCCA
GTCACTGGTG AAATTACTGT TGCTTACGAA ACTAAGCATG CTTACGGAAT TAAGTCTGAC
GAAGGTGCAG AAGTCTTAAT TCACATTGGT ATTGACACTG TTAACATGAA GGGCGAAGGC
TTTACTAGTG ATGTAAAACA AGGCCAACAT GTTGAAAAAG GTGAAAAGTT AGGAACTGTT
GATTTAGATG CTGTTAAAAA AGCAGGATAC GACACAACTG TTATGACTGT TATTACTAAC
ACAGCTAGCT ATGCAAATGT TCAACGTATT GATGGCGTAG ACAAGAAGCA TGGCGACGAT
TTAATCGCAG TTACTAAGAG ATAA
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| Protein sequence | MDHKKVAETV IEAVGRDNLV AAAHCATRLR LVLKDDSKVN MKMLDSDPDI KGTFKTNGQF
QIIIGPGDVN NVYDELIKMT GLSELSTDDL KKVAQKDQKF NPVMAFIKLL SDIFVPIIPA
LVAGGLLMAL NNFLTSPGLF GAKSVVQMAP NVKGLSEIIQ VMSAAPFIFM PILVGMSAAK
RFGANQFLGA TIGMIMTTPA LGGAGKYWDI FGLHVSQTNY QYQVIPVLVA VWLLAFLEKR
FHKWLPSAVD FTFTPLLSIM ITGFLTFTII GPVFKGVSDA ITAAIVWLYN TTGAFGMGIF
GLSYSAIVTT GLHQSFPAVE TQLLAEYARG RGSGDFIFVT ACMANVAQGA ATFAVYFLTK
NEKVKGLASS SGVSALLGIT EPALFGVNLK YKFPFFCALI GAGVGAAFAG LMHVTAAALG
SAGFLGFLSM VPKSIPMWAL SVAISFIVAF ALTFVYGKRH FKEDVVEESG TVESAGDQVA
QQEKADQIIK EDKELHDEVI AAPVSGKAES LKDVKDPVFS TEAMGKGAAM VPSEGTIYSP
VTGEITVAYE TKHAYGIKSD EGAEVLIHIG IDTVNMKGEG FTSDVKQGQH VEKGEKLGTV
DLDAVKKAGY DTTVMTVITN TASYANVQRI DGVDKKHGDD LIAVTKR
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