Gene LGAS_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1763 
Symbol 
ID4439028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand- 
Start bp1748059 
End bp1748661 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content36% 
IMG OID639673581 
Productintegral membrane protein 
Protein accessionYP_815565 
Protein GI116630317 
COG category[S] Function unknown 
COG ID[COG5523] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00234926 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0438415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT CAGAATTAAA AGCAAATGCG AGAGAGCAAT TACGTGGTAA TTGGCTCTGG 
GCGGTCGGTT TATGTTTAGT TGGTGCAATT ATGGCTAGTT TGACTAGTTC TTTTAGTATT 
GGAATCTTAG GCGGAATGGT TTTATATGGT GTTACTTATA CATTTTTAGC CTTGGCAGAT 
GGTAAAAAAA TTGAAAATAT TTTTAGTGCT ATGTTCTCTG GATTTACTAG TCGTAAGTTT 
TTGCCAACGT TATTAACATC TTTGCTCGTT GATATTTTTA TTTCCTTGTG GACAATTCTT 
CTAATTATCC CAGGAATTGT TAAGGGATAT TCTTATTCCA TGGCACCTTA CATTGTTAAG 
GATCTGGCTG AAGCTGGCAA AGATATTGCG CCAACTGAAG CAATTAACAA AAGTCGTAAG 
TTAATGGATG GTCATAAAGT CGAGTTATTC TTATTAGATT TAAGTTTTAT TGGCTGGGCA 
ATTTTAGCTA CTATTCCGTT GGGCTTAGGC TGGCTCTGGC TTACACCTTA TTATCAAGCA 
ACTAAAGCAA ATTACTACCG TCAATTAGCT GGTGATCAGT TCAAAAAGAC TATTGAAGCA 
TAA
 
Protein sequence
MKRSELKANA REQLRGNWLW AVGLCLVGAI MASLTSSFSI GILGGMVLYG VTYTFLALAD 
GKKIENIFSA MFSGFTSRKF LPTLLTSLLV DIFISLWTIL LIIPGIVKGY SYSMAPYIVK 
DLAEAGKDIA PTEAINKSRK LMDGHKVELF LLDLSFIGWA ILATIPLGLG WLWLTPYYQA 
TKANYYRQLA GDQFKKTIEA