Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1758 |
Symbol | |
ID | 4439023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1744212 |
End bp | 1745264 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639673576 |
Product | peptide ABC transporter permease |
Protein accession | YP_815556 |
Protein GI | 116630312 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000026517 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTAG CTCTAAAAGA AATAAAATAC GAAAAATTGC GTTATGGCTT AATTACTTTA ATGATTTTTT TGATTTCATA TTTAATTTTT ATGCTTTCAT CGCTAGCAGT TGGCTTAGCT TCGCAAAATA CGCAGGCCGT CAATAGTTGG CAAACACAAT CGGTTGTGTT GAATGATAAT GCTAATGTAA GTTTGAGTCA GTCGCTTCTT ACTAAGGCAG ACTTGAAAGA TTTTAAAAAG ACTAATAATG ATAGTTTCAT TGGCTTAGTA CCTATTGTGA TTAAAGAAAA GAAACATCAG ACAATTTCTG CACAATTTAT CGGTTTAAAG AAAGACGAAT ACATATATAA AGATCTAGAC ATTGTTTCTG GTCGAAAAGC TAAGCATAAT GACGAAATAG CTGTTGATCA AATTCTTTGG GATCGTGGTT ATCGCTTGGG TGATAAAGTT ACATTAAATG GGAGTGATCA AAAGTATAAA ATTGTTGGTT TCTTAAAGAA TGCCAAAATC AATATTGCTC CAATTGCTTA TGGTACGATG GCAACTTGGA GAAAATTACG CCCAATGGCC CCAAATATTG AAGCTTCTGG AATTATTTCT AAAAAGAACT TAGATTTCAA AGCTAAAAAT GTTAAATCTT ATGATAAGCA AACCTTTATT AATAAGTTGC CTGGCTATAC TGCTCAAAAT TCAACTTTTG AATTAATGAT TGGTTTCTTA TTCGTAATTT CATTAATTAT TATTGCGGTA TTTTTATACA TTTTAACAAT GCAAAAGATG CCGAATTACG CAGTTTTAAG AGCACAAGGG ATTCCAAGTA AGACTTTAAT TGGCGCAACG TTAAGTCAAT CGCTTATTTT GGTAATTTTA GGTACGGTTT TAGCATATAT TTTGATGCTT ATTACAGTTA GCGTGATGCC TGCTACTGTG CCAATTAATT TTGCACCATG GATTATGATC TCGACTTTTG CTGGGATGAT TTTAATGGGA ATAATCGGTG GTTTGATTCC AATTAAATCA ATTCTTAAAG TTGACCCTTC AAAGGCTGTT TAA
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Protein sequence | MFLALKEIKY EKLRYGLITL MIFLISYLIF MLSSLAVGLA SQNTQAVNSW QTQSVVLNDN ANVSLSQSLL TKADLKDFKK TNNDSFIGLV PIVIKEKKHQ TISAQFIGLK KDEYIYKDLD IVSGRKAKHN DEIAVDQILW DRGYRLGDKV TLNGSDQKYK IVGFLKNAKI NIAPIAYGTM ATWRKLRPMA PNIEASGIIS KKNLDFKAKN VKSYDKQTFI NKLPGYTAQN STFELMIGFL FVISLIIIAV FLYILTMQKM PNYAVLRAQG IPSKTLIGAT LSQSLILVIL GTVLAYILML ITVSVMPATV PINFAPWIMI STFAGMILMG IIGGLIPIKS ILKVDPSKAV
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