Gene LGAS_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1747 
Symbol 
ID4439047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1733376 
End bp1734179 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content34% 
IMG OID639673565 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_815536 
Protein GI116630301 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000126573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGGC CAAACGTTTT ACCACTAGAG CATGTGCCTA ATGCACGTGA TTTAGGAGGC 
TATGTAGGTT TTGATGGCCG TAAAATTAAA ATGCACCGTC TTCTTAGAAC TGGTAAATTA
TGTCAAATGA CCAAGGAAGA TGAAACTTTT TTACTTAATT ATGGCTTAAC TAAAATTATT
GATTTGCGTT CACCTAAGGA AATTCAAATT ACTCCTGATG TTATACCGGC AGGAATAGAG
CATATTGATA ATCCAATTCA TGGCAATCAG AGTGCAGAAA CAGATCAAAA GATAGCACAA
TTGAAGAAAA CATATACTAA AGATCAATAT GCTGGCTTTA AAACGATGTG TCATCAGTAT
TATTCTTCTG TTAGTCAAGA ATACTCGCAA AAAGCATTTA GAAATCTACT GAATATCTTC
GCTAATACTA AAGATGGTGC GATTATTTTT CATTGTTCTG AAGGAAAAGA TCGTACGGGG
CTAGCTACAG TTTTAATTTT GTATCTTTTA GGCGTTGATA TGGAAACTAT CAGACAAGAC
TATTTATTTT CAAACCTAAT GCTTGGCAAA TATCAGGCTA TGATGAATCA AAAGATAGTT
GACGAAGGCG GCGGTGTAGT TTTACGTGCC AATGTTAGAA GCTTAGCAAG TGTCGCAAAT
GAATATTTGG ATACAGCTCT TTTATTAATT GATGAAAAGT ATAACGGCCT TGATAACTAT
ATTAAAAATA TTTTGAAGAT TGATGATGAG TTGATTCAAA GCTTAAGAGA GTTGTATTTA
GAGCCAAAGA GGGCATCAAA ATGA
 
Protein sequence
MIRPNVLPLE HVPNARDLGG YVGFDGRKIK MHRLLRTGKL CQMTKEDETF LLNYGLTKII 
DLRSPKEIQI TPDVIPAGIE HIDNPIHGNQ SAETDQKIAQ LKKTYTKDQY AGFKTMCHQY
YSSVSQEYSQ KAFRNLLNIF ANTKDGAIIF HCSEGKDRTG LATVLILYLL GVDMETIRQD
YLFSNLMLGK YQAMMNQKIV DEGGGVVLRA NVRSLASVAN EYLDTALLLI DEKYNGLDNY
IKNILKIDDE LIQSLRELYL EPKRASK