Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1747 |
Symbol | |
ID | 4439047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1733376 |
End bp | 1734179 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673565 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_815536 |
Protein GI | 116630301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000126573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGGC CAAACGTTTT ACCACTAGAG CATGTGCCTA ATGCACGTGA TTTAGGAGGC TATGTAGGTT TTGATGGCCG TAAAATTAAA ATGCACCGTC TTCTTAGAAC TGGTAAATTA TGTCAAATGA CCAAGGAAGA TGAAACTTTT TTACTTAATT ATGGCTTAAC TAAAATTATT GATTTGCGTT CACCTAAGGA AATTCAAATT ACTCCTGATG TTATACCGGC AGGAATAGAG CATATTGATA ATCCAATTCA TGGCAATCAG AGTGCAGAAA CAGATCAAAA GATAGCACAA TTGAAGAAAA CATATACTAA AGATCAATAT GCTGGCTTTA AAACGATGTG TCATCAGTAT TATTCTTCTG TTAGTCAAGA ATACTCGCAA AAAGCATTTA GAAATCTACT GAATATCTTC GCTAATACTA AAGATGGTGC GATTATTTTT CATTGTTCTG AAGGAAAAGA TCGTACGGGG CTAGCTACAG TTTTAATTTT GTATCTTTTA GGCGTTGATA TGGAAACTAT CAGACAAGAC TATTTATTTT CAAACCTAAT GCTTGGCAAA TATCAGGCTA TGATGAATCA AAAGATAGTT GACGAAGGCG GCGGTGTAGT TTTACGTGCC AATGTTAGAA GCTTAGCAAG TGTCGCAAAT GAATATTTGG ATACAGCTCT TTTATTAATT GATGAAAAGT ATAACGGCCT TGATAACTAT ATTAAAAATA TTTTGAAGAT TGATGATGAG TTGATTCAAA GCTTAAGAGA GTTGTATTTA GAGCCAAAGA GGGCATCAAA ATGA
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Protein sequence | MIRPNVLPLE HVPNARDLGG YVGFDGRKIK MHRLLRTGKL CQMTKEDETF LLNYGLTKII DLRSPKEIQI TPDVIPAGIE HIDNPIHGNQ SAETDQKIAQ LKKTYTKDQY AGFKTMCHQY YSSVSQEYSQ KAFRNLLNIF ANTKDGAIIF HCSEGKDRTG LATVLILYLL GVDMETIRQD YLFSNLMLGK YQAMMNQKIV DEGGGVVLRA NVRSLASVAN EYLDTALLLI DEKYNGLDNY IKNILKIDDE LIQSLRELYL EPKRASK
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