Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1746 |
Symbol | |
ID | 4439046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1732453 |
End bp | 1733379 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673564 |
Product | thiamine biosynthesis membrane-associated lipoprotein |
Protein accession | YP_815534 |
Protein GI | 116630300 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000775168 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGAGA ATTATGCTTC AACTCCAATT TCAAAAGTTG GTCGTGGCTT AGGCACGGTT ATTACTTTAC AGATCTATGG CGATCAAAAC GAAAAAATCT TAAATCAGAG CTTTGATTTA ATTGCGGGAT ATGAGGATCG CTTAACTGTA AATCGTGATC ATTCTGAAGT GATGGATGTT AATCATGCTG CAGGTCTTCA TCCTGTTCAA GTTTCAGCAA GCACATATAA TCTAATTAAG CTAGCAGTTT ATGAAAGTAA GCAAAACTTC GGTTTCAATG CACTTATTGG ACCAGTTGTA AAACTCTGGC ATATTGGCTT TAAAGGAGCA CATGTCCCCA CTGATGCACA AATCAAAGCG AAGATGAGTT TAACTAATCC TGATGATGTT GTTTTAGACG ATGCTAACCA AACTGTTTTC CTAACTAAAA AAGGAATGGA ACTTGATTTA GGAGGCATTG CTAAAGGTTA TATTGCAGAT AGAATTAGAG ATCTTTGGCG TGCATATGAT GTGCGAGCTG GGATTATCAA TTTAGGCGGC AATGTTTTAT TTGTAAATAG TTCTCCAAAA AGAGCAAGTG GCGAATGGAT TTTAGGTGTT CAAGATCCGA AAAAGAAACG TGGAGATAAC CTTACCACTG CCACAGTTCA CGAATGCTCA GCTGTAACTA GTGGGACATA TGAACGCTTT TTAGAAATTA ATGGCAAGAA ATACCATCAC ATTATTGATC CTAAGACTGG GTATCCAGTT CAGACTCATG TAGCGGGCGT TACCCTATTT ACTCGGGATT CAGTTCAAGC AGAGATTGAA TGTAAACGAC TATTTTTTGC TGGTGGATCG ATTCCAGGAT GGAAAAATGA TAAGGCCGGT CGCTATGGTG CAATATTTGT GTACGATGAC GATTCAATTG AAAGAATTGG CGTATAA
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Protein sequence | MIENYASTPI SKVGRGLGTV ITLQIYGDQN EKILNQSFDL IAGYEDRLTV NRDHSEVMDV NHAAGLHPVQ VSASTYNLIK LAVYESKQNF GFNALIGPVV KLWHIGFKGA HVPTDAQIKA KMSLTNPDDV VLDDANQTVF LTKKGMELDL GGIAKGYIAD RIRDLWRAYD VRAGIINLGG NVLFVNSSPK RASGEWILGV QDPKKKRGDN LTTATVHECS AVTSGTYERF LEINGKKYHH IIDPKTGYPV QTHVAGVTLF TRDSVQAEIE CKRLFFAGGS IPGWKNDKAG RYGAIFVYDD DSIERIGV
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