Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1710 |
Symbol | |
ID | 4439097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1690621 |
End bp | 1691403 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639673528 |
Product | hypothetical protein |
Protein accession | YP_815465 |
Protein GI | 116630264 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00000260322 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAAAG AGCATGTGAG TCAAGACTAT GCCGCTGAAG TGCTCGATAC CTGCTTAAAA GCGGGTAGGT TAATGATCGA AGGTGGCAGT GAAACTTATC GAGTTGAAGA TACGATGATG AGAATAGCCC GCAATGCTGG TATTGCGGGT GCTAGATGTT TTACAACTCC GACTGGAATA TTTATGAGTT TAGGTGAGCA TTCTTATACT CAAGTTACAC AAGTTAAGAA AAGAAACATT AACTTAGAGC TGGTAGACCG AGTTAATGAA TTATCACGTG AATTTGCTGC TAAGAAAATC ACTTTGAAGG AATTGCAGGA AAGACTTCAA CAAATTTCAA TTTCAATTCC AGATTTTCCA ATCTGGCTTC AAATTATCGG GGCTGCAATT TTGAGTCCGA CTTTAATGGT CTTATTTATG GATGATTATG ACTGGATTGA TTTTCCAGCA GCTGCTGTTA TTGGTGGCGT ATCATATGCT GTTTATTTGG CTATTAAACG CTATACTAAT ATTCGTTTTT TAGCTGAAAT GGTGACGGCA ATTTTTATGG GAGTAATTAC CATTTTTGCC TGCAAGTTGT TTCCGAAGCT TATTGTCGAT AATATTTTAA TCGGATCCTT AATGACATTG GTACCAGGAG TAGCGATAAC TAATGCTCTG CGAGATCTAT TTGGCGGTGA TTTGTTATCA GGGATGGCCC GAACAACAGA GGCAGTTTTA ACTGCTATTG CTCTTGGTGG CGGCATCGGT ATTGCAATTA AGTTATTATG GGGTGTAATG TAA
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Protein sequence | MNKEHVSQDY AAEVLDTCLK AGRLMIEGGS ETYRVEDTMM RIARNAGIAG ARCFTTPTGI FMSLGEHSYT QVTQVKKRNI NLELVDRVNE LSREFAAKKI TLKELQERLQ QISISIPDFP IWLQIIGAAI LSPTLMVLFM DDYDWIDFPA AAVIGGVSYA VYLAIKRYTN IRFLAEMVTA IFMGVITIFA CKLFPKLIVD NILIGSLMTL VPGVAITNAL RDLFGGDLLS GMARTTEAVL TAIALGGGIG IAIKLLWGVM
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