Gene LGAS_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1710 
Symbol 
ID4439097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1690621 
End bp1691403 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID639673528 
Producthypothetical protein 
Protein accessionYP_815465 
Protein GI116630264 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00000260322 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAAG AGCATGTGAG TCAAGACTAT GCCGCTGAAG TGCTCGATAC CTGCTTAAAA 
GCGGGTAGGT TAATGATCGA AGGTGGCAGT GAAACTTATC GAGTTGAAGA TACGATGATG
AGAATAGCCC GCAATGCTGG TATTGCGGGT GCTAGATGTT TTACAACTCC GACTGGAATA
TTTATGAGTT TAGGTGAGCA TTCTTATACT CAAGTTACAC AAGTTAAGAA AAGAAACATT
AACTTAGAGC TGGTAGACCG AGTTAATGAA TTATCACGTG AATTTGCTGC TAAGAAAATC
ACTTTGAAGG AATTGCAGGA AAGACTTCAA CAAATTTCAA TTTCAATTCC AGATTTTCCA
ATCTGGCTTC AAATTATCGG GGCTGCAATT TTGAGTCCGA CTTTAATGGT CTTATTTATG
GATGATTATG ACTGGATTGA TTTTCCAGCA GCTGCTGTTA TTGGTGGCGT ATCATATGCT
GTTTATTTGG CTATTAAACG CTATACTAAT ATTCGTTTTT TAGCTGAAAT GGTGACGGCA
ATTTTTATGG GAGTAATTAC CATTTTTGCC TGCAAGTTGT TTCCGAAGCT TATTGTCGAT
AATATTTTAA TCGGATCCTT AATGACATTG GTACCAGGAG TAGCGATAAC TAATGCTCTG
CGAGATCTAT TTGGCGGTGA TTTGTTATCA GGGATGGCCC GAACAACAGA GGCAGTTTTA
ACTGCTATTG CTCTTGGTGG CGGCATCGGT ATTGCAATTA AGTTATTATG GGGTGTAATG
TAA
 
Protein sequence
MNKEHVSQDY AAEVLDTCLK AGRLMIEGGS ETYRVEDTMM RIARNAGIAG ARCFTTPTGI 
FMSLGEHSYT QVTQVKKRNI NLELVDRVNE LSREFAAKKI TLKELQERLQ QISISIPDFP
IWLQIIGAAI LSPTLMVLFM DDYDWIDFPA AAVIGGVSYA VYLAIKRYTN IRFLAEMVTA
IFMGVITIFA CKLFPKLIVD NILIGSLMTL VPGVAITNAL RDLFGGDLLS GMARTTEAVL
TAIALGGGIG IAIKLLWGVM