Gene LGAS_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1709 
Symbol 
ID4439096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1690151 
End bp1690621 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content41% 
IMG OID639673527 
Producthypothetical protein 
Protein accessionYP_815464 
Protein GI116630263 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000000820605 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTTTTT GGTTAGAAAT AATTGTTAAT TTAGTGTTTG CCTGGCTTGC TTCTGTAGGC 
TTTGGGCTGA TTATTAATGT CCCTCACCGT GCTCTTGTGT TATGTGGTGT CAGCGGGAGT
GCGGGTTGGA TCTTATATTG GTTGGCTAAT CGAATTGGGA TTGGCCGATT AGGATCTAAT
CTTTTAGGAG CACTGTGCGT TGGAATTTTA GGTTTAGTAT TTGCTCGGAT TAAAAAATGT
CCCGTAACTG TCTTTAATAT TCCTGGAGTT GTGCCCCTTG TGCCAGGTGT ACCAGCTTAT
CAAGCAGTAC GTGCGATGGT AGAAGGACAG CTGTCTGATG CAGAAGACCT AATTTTACGT
GTGGCGATTG TCACAATTGC GATTGCGATG GGTTTTATGC TAGCTCAACT AATGGGAGAG
ATCTTTTTTA AGACGCGCAA TAATAGAAAA AATAAGAAAA ATTTAGTATA A
 
Protein sequence
MPFWLEIIVN LVFAWLASVG FGLIINVPHR ALVLCGVSGS AGWILYWLAN RIGIGRLGSN 
LLGALCVGIL GLVFARIKKC PVTVFNIPGV VPLVPGVPAY QAVRAMVEGQ LSDAEDLILR
VAIVTIAIAM GFMLAQLMGE IFFKTRNNRK NKKNLV