Gene LGAS_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1687 
Symbol 
ID4439109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1669801 
End bp1670493 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content38% 
IMG OID639673505 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_815413 
Protein GI116630241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0735742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000000669272 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAGG AAGAATTTAT CAACAAAATC CATGGTGGTT TAATTATTTC ATGTCAGGCT 
TTACCTGGCG AACCACTCTA TACCGAAGAA GGCGGCATTA TGCCACTAAT GGCAAAAGCT
GCTCAAGAAG CTGGTGCAAC AGGTTTAAGA GCAAATTCCG TCAGAGATAT TAAACAAATT
AAAAAAGTCG TCGATCTACC AATGATCGGA ATTATTAAAC GAGACTATCC ACCAGAAAAG
CCATACATTA CTCCAACTAT GAAAGAAGTA GATGAATTAA TGGAAACAGG CGTTGAAGTA
ATTGCCCTTG ACTGTACCTT ACGGCCAAGA CATGATGGCA AGACAGTAGC TGAATTTATT
AAAGAAATTA AAGCTAAATA TCCAAACCAA CTTTTAATGG CAGATACTTC AAACTTTGAA
GAAGCTAAAA ATGCCTATGA AGCAGGCGTA GATTTTGTTG GTACTACTCT TTCTGGCTAC
ACCGAAGAAA GTCCTAAGAC TGACCATCCA GATTTTGATT TAATTAAAGC TTTAGTCGAT
GATGGTCTAC CTGTGATTGC TGAAGGAAAA ATTCATACTC CAGAACAATT AAAGCAAGTA
ATTGACATCA ACCCAGCAGG AATTGTAGTT GGCGGTGCAA TTACTCGCCC ACTTCAGATT
GCTAAAACAT TCACTTCTGT TTTTGAAAAA TAA
 
Protein sequence
MNKEEFINKI HGGLIISCQA LPGEPLYTEE GGIMPLMAKA AQEAGATGLR ANSVRDIKQI 
KKVVDLPMIG IIKRDYPPEK PYITPTMKEV DELMETGVEV IALDCTLRPR HDGKTVAEFI
KEIKAKYPNQ LLMADTSNFE EAKNAYEAGV DFVGTTLSGY TEESPKTDHP DFDLIKALVD
DGLPVIAEGK IHTPEQLKQV IDINPAGIVV GGAITRPLQI AKTFTSVFEK