Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1687 |
Symbol | |
ID | 4439109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1669801 |
End bp | 1670493 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673505 |
Product | N-acetylmannosamine-6-phosphate 2-epimerase |
Protein accession | YP_815413 |
Protein GI | 116630241 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3010] Putative N-acetylmannosamine-6-phosphate epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0735742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000000000669272 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGG AAGAATTTAT CAACAAAATC CATGGTGGTT TAATTATTTC ATGTCAGGCT TTACCTGGCG AACCACTCTA TACCGAAGAA GGCGGCATTA TGCCACTAAT GGCAAAAGCT GCTCAAGAAG CTGGTGCAAC AGGTTTAAGA GCAAATTCCG TCAGAGATAT TAAACAAATT AAAAAAGTCG TCGATCTACC AATGATCGGA ATTATTAAAC GAGACTATCC ACCAGAAAAG CCATACATTA CTCCAACTAT GAAAGAAGTA GATGAATTAA TGGAAACAGG CGTTGAAGTA ATTGCCCTTG ACTGTACCTT ACGGCCAAGA CATGATGGCA AGACAGTAGC TGAATTTATT AAAGAAATTA AAGCTAAATA TCCAAACCAA CTTTTAATGG CAGATACTTC AAACTTTGAA GAAGCTAAAA ATGCCTATGA AGCAGGCGTA GATTTTGTTG GTACTACTCT TTCTGGCTAC ACCGAAGAAA GTCCTAAGAC TGACCATCCA GATTTTGATT TAATTAAAGC TTTAGTCGAT GATGGTCTAC CTGTGATTGC TGAAGGAAAA ATTCATACTC CAGAACAATT AAAGCAAGTA ATTGACATCA ACCCAGCAGG AATTGTAGTT GGCGGTGCAA TTACTCGCCC ACTTCAGATT GCTAAAACAT TCACTTCTGT TTTTGAAAAA TAA
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Protein sequence | MNKEEFINKI HGGLIISCQA LPGEPLYTEE GGIMPLMAKA AQEAGATGLR ANSVRDIKQI KKVVDLPMIG IIKRDYPPEK PYITPTMKEV DELMETGVEV IALDCTLRPR HDGKTVAEFI KEIKAKYPNQ LLMADTSNFE EAKNAYEAGV DFVGTTLSGY TEESPKTDHP DFDLIKALVD DGLPVIAEGK IHTPEQLKQV IDINPAGIVV GGAITRPLQI AKTFTSVFEK
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