| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1669 |
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| Symbol | |
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| ID | 4439780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1642422 |
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| End bp | 1644440 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673491 |
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| Product | trehalose PTS trehalose component IIBC |
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| Protein accession | YP_815399 |
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| Protein GI | 116630227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01995] PTS system, beta-glucoside-specific IIABC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA ATTATGATGC TCTAGCAAAA ACAATTATTA AGGACGTTGG CGGAAAAGAC
AACGTAATTA GCGTGGTTCA CTGTACAACA CGCTTGCGTT TTAAGTTAAA AGATGAAAAG
AAGGCTAATG ATGATGCCTT AAAAGATACT GATGGTGTTG TTACAGTTGT TAAAGCTGGT
GGACAATATC AGGTAGTTAT TGGTAATGAA GTTGCTGACG TATATGAAGC AGTCTTAAAA
GAAGGTGGCT TTTCTGGTGG CGGTCAAGTT GCTGATGACG ATTTAGATGA TAGCAATATG
AGTTTAATGG ATAAAGCTAT CGATCTTATT TCAGGTATCT TTACTCCAAT TTTAGGGCCA
ATGGCTGCAG CAGGTATGAT TAAAGGATTA ACTGCAATGT GTGCTTCATT TGGCTGGCTT
GCTAAAACTT CTGGTACTTA TGAAGTTTTG TATGCAATTG GGGATGGTTT CTTTTACTTC
TTACCACTTA TTCTAGCAAT TACTAGTGCT AAGAAATTTA AGGTAGACCG CTTTACAGCC
ATTACAATTG GTGCTGCAAT GTGTTATCCA GCAATGGTAG CAATGAATAG CAGCAAAAAA
GTTTTATTTG ATTTATTTAA CGGAACATTT TTACATTCAC AAGTTCATGC TACATTCTTA
GGCATTCCAA TTATTTCAAT GAACTATACT TCAACAGTTA TTCCAATTAT TTTAGCAGTT
TGGTTTGCTT CTGTTGTTGA AAGATGGTGC AAAAAATGGA TTCCAACTGT GGTAAAAACT
TTCTTAGTTC CATTTGTTAC TTTACTGATT GTTGTTCCTT TGACTTTCTT AATTATCGGG
CCACTTGCTA CTTGGATTGG TAATGCACTT GCTGCCATTA CTTCAGCTGT TTACAACTTT
AGTCCAGTAT TGGCTGGTGT TTTACTTGGT AGCTTCTGGC AAGTATTCGT TATTTTCGGT
GTCCACTGGG GATTTGTCGC AGTGATGATG TCAAACATTG CTGCTTTAGG TTATGACCCA
ATCTTAGGCT TATCATTAGG TGCTTCATTT GCACAAATTG GTGTTGTTTT AGCAATCTTA
TTACAAACTA AAGATCAAAA ATTAAAAGGT ATTGCACTTC CAGCATTCTT ATCAGGAATT
TTCGGTGTTA CTGAACCAGC TATTTATGGT GTAACTCTTC CACGTAAAAA GCCATTTGTC
TTAAGTTGTA TTGCAGCTGG TATTGGTGGT GGCTTGATTG GATTCTTTGG TACTAAGATG
TACATGATGG GCGGTATGGG AGTCTTCGTA ATTCCTGCTG CTATTGGTCC AAAGACTGGC
GTTGATATGA GTGTTTACGG TTTGATGATT GCGATGGCTG TGTCATTTGT TCTTGGATTT
ATTTTACAAA TAGCTCTTGG CAAGAAGAGT GTTGATCAAG CTTATGATGA AAAACAAGCA
AAGACTGTTC AAGAAGTTGC AAACCAAGCT GATGCTATTG CAAAAGCTGC TCCAAGTTTA
GCAAGCACTA GCGACTTAAA TGTTTCAACT GAATTAGTTA GTCCACTTGC TGGTGAATTA
TTACCACTTT CAGAAGTAAA AGACGAAGTG TTCTCAAGCG GTGCTATGGG TGAAGGAGTT
GCTGTTGAGC CTAGCGAAGG AGTTTTACAT GCACCAGCAG ATGGTAAGGT TGTGATGACT
TTCCCAACTG GACATGCTAT CGGAATGAAG ACAAGTGATG GTGCAGAAAT CTTAATGCAC
ATCGGAATGG ATACTGTTAA CTTACAAGGA CATGGTTTTG AAACCTTAGT TGCAAAAGGT
GACGAAGTTA AAGCAGGTGA TGAGTTAGTT AAGTTTGATA TCGATGCAAT TCATGCTAAG
GGTTATGTTG TGACGACTCC AATTGTAGTC ACTAACTCAA AAGATTATGA AAAGATCACT
GTTGTTAGCC AAGGTAAGGT AAAAGTGGGA CAAGAAATTC TAGACTTAGA AGGAGCTAGT
GAAACAGAAA CAGCTAGTTC AAATCCGCAA ATGGCTTAG
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| Protein sequence | MAKNYDALAK TIIKDVGGKD NVISVVHCTT RLRFKLKDEK KANDDALKDT DGVVTVVKAG
GQYQVVIGNE VADVYEAVLK EGGFSGGGQV ADDDLDDSNM SLMDKAIDLI SGIFTPILGP
MAAAGMIKGL TAMCASFGWL AKTSGTYEVL YAIGDGFFYF LPLILAITSA KKFKVDRFTA
ITIGAAMCYP AMVAMNSSKK VLFDLFNGTF LHSQVHATFL GIPIISMNYT STVIPIILAV
WFASVVERWC KKWIPTVVKT FLVPFVTLLI VVPLTFLIIG PLATWIGNAL AAITSAVYNF
SPVLAGVLLG SFWQVFVIFG VHWGFVAVMM SNIAALGYDP ILGLSLGASF AQIGVVLAIL
LQTKDQKLKG IALPAFLSGI FGVTEPAIYG VTLPRKKPFV LSCIAAGIGG GLIGFFGTKM
YMMGGMGVFV IPAAIGPKTG VDMSVYGLMI AMAVSFVLGF ILQIALGKKS VDQAYDEKQA
KTVQEVANQA DAIAKAAPSL ASTSDLNVST ELVSPLAGEL LPLSEVKDEV FSSGAMGEGV
AVEPSEGVLH APADGKVVMT FPTGHAIGMK TSDGAEILMH IGMDTVNLQG HGFETLVAKG
DEVKAGDELV KFDIDAIHAK GYVVTTPIVV TNSKDYEKIT VVSQGKVKVG QEILDLEGAS
ETETASSNPQ MA
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