Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1550 |
Symbol | |
ID | 4439244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1538917 |
End bp | 1539438 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639673377 |
Product | acetyltransferase |
Protein accession | YP_815339 |
Protein GI | 116630167 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000469847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 96 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTAA TTTATACTCG CTTTGCTGCT AATACAGATT TACCTGATAT TATGCATATT ATTAATGAAG CTAAATCTTT CTTAAAACAG AGTGGAAGTA GTCAGTGGCA AGGAAATTAT CCTACTGAAG AAACTATTGA AACTGACATA AAGAATAAAT ATGGGTTAGT TTTAATAGTA AATAATCAAA TTGCAGGTTA TGCAGCAAGC ATAGTTGGTG AAGAGCCAAC ATATCAAAAA ATTGATGGTG CTTGGAAAAA TAAGATTGAT CCTTATGCTA CTTTTCATCG CTTAGCGATT AGTAGTAAAT ATCGAGGAAT GCACCTGGCT AGTTTTATGT TTTCAGATTT AATTTCAATT ATGGCTAGCC AGAAAATCAG AAATTTTAGA ATTGATACTT CACGAAAAAA CGAAATTATG CAACATTTAG CTGTAAAACA TAATTTTATT GAACGTGGAA TTATTCAAGT TGATGAAGAT CCCAAAGATC CAAGTCGGTT AGCATATGAA TTGAATATTT AA
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Protein sequence | MSLIYTRFAA NTDLPDIMHI INEAKSFLKQ SGSSQWQGNY PTEETIETDI KNKYGLVLIV NNQIAGYAAS IVGEEPTYQK IDGAWKNKID PYATFHRLAI SSKYRGMHLA SFMFSDLISI MASQKIRNFR IDTSRKNEIM QHLAVKHNFI ERGIIQVDED PKDPSRLAYE LNI
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