Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1511 |
Symbol | gatB |
ID | 4439301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1502316 |
End bp | 1503746 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639673338 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_815304 |
Protein GI | 116630132 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.994441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTA AATCGACTAT TGGTCTAGAA GTCCACTTCG AATTAAAAAC AAAGAGTAAG ATTTTTTCTC CATCACCAGT TACTTATGGT GCTGAAGCAA ACACTGAAAC TAATGTTATT GACTGGGCAA TGCCTGGTGT CTTACCTCGT TTGAATAAAG ATGTTTATCG TCTTGGTATC ATGGTTGCCT TGGCAACTCA TTCACATATT TTGCCTGTAA CTCATTTTGA CCGTAAGAAC TACTTCTACC CAGATAACCC TAAGGCTTAC CAAATTACTC AGTTCTTCCA ACCACTTGCT CGCGATGGTT ACATTGAAGT TGAAGTTCGC GGCAAGAAGA AGCGCATTGG TATTCACGAA ATGCACATCG AAGAAGATGC TGGTAAGAAC ACTCACGGAG CTAATGGTTA TTCATACGTT GACTTAAACC GTCAGGGTGT TCCACTTCTT GAAGTTGTTT CTGAACCTGA TATGGAAGAT CCAGAAGAAG CTTACGCATA CTTGACTAAA TTACGTCAGA TCGTTCAATT TACTGGTGCA TCTGACGTTA AGATGGAAGA AGGTTCAATG CGTGTTGATA CCAACATTTC TATCCGTCCT GCTGGTCAAG AAAAGCTTGG TACTAAGGTT GAAATGAAGA ACTTGAACTC ATTTGACCAC GTTCGTCGTT CTCTTGCTTA TGAAGAGAAG CGTCAACAAC AAGTACTTCT TTCTGGTGGT AGAGTTCAAC TTTCCACTCG TCGTTTTGAT GAAGCTACTG GTAAGACTGT CTTAGAGCGT GTTAAGGAAG GCGATGCAGA TTACCGTTAC TTCCCAGAAC CAGATATTGC ACCTTACCAC ATTAAGCAAA GCTGGATCGA TGAAATTGCA GAAAGTTTAC CTGAATCACC ATTTGAACGT CGCAAGCGCT ACGTTAAAGA ATATGGCATT AAGGAATACG ATGCTGACGT TATTTTGCAA ACTAAGGAAT CAAGTGATTT CTACGATGCT GCAGTAGCTG CTGGTGCTGA TCCAACTTTA GCTGCTAACT GGTTGAATAC TCAAGTTAAT GGTTACTTGA ATGAAAACCA AGTTGGTATT GCAGATATTA AATTAACTCC AGAGCACTTA GCTGAAATGA TCAAGATGAT CAAAGATGGA ACTATTTCAT CCAAGATTGC TAAGAAAGTC TTCAAGGAAT CTATTGAAAA TGGAACTGAT CCTAAGAAAT ATGTTGAAGA TAAGGGTATG GTTCAATTAT CAGATGTTTC TGTTCTTGGG CCAATGGTAA CTAAGGTTGT TGATGATAAC CCACAATCTG TTGAAGACTT CAAGAATGGT AAGGATCGTG CAATTGGATT CTTAGTTGGT CAAATCATGA AGCAAACTCG TGGTAAGGCT AACCCTAAGG TTGTTAATCA ATTGCTTAAT AAGGAACTTC AAAGCCGTTA A
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Protein sequence | MNFKSTIGLE VHFELKTKSK IFSPSPVTYG AEANTETNVI DWAMPGVLPR LNKDVYRLGI MVALATHSHI LPVTHFDRKN YFYPDNPKAY QITQFFQPLA RDGYIEVEVR GKKKRIGIHE MHIEEDAGKN THGANGYSYV DLNRQGVPLL EVVSEPDMED PEEAYAYLTK LRQIVQFTGA SDVKMEEGSM RVDTNISIRP AGQEKLGTKV EMKNLNSFDH VRRSLAYEEK RQQQVLLSGG RVQLSTRRFD EATGKTVLER VKEGDADYRY FPEPDIAPYH IKQSWIDEIA ESLPESPFER RKRYVKEYGI KEYDADVILQ TKESSDFYDA AVAAGADPTL AANWLNTQVN GYLNENQVGI ADIKLTPEHL AEMIKMIKDG TISSKIAKKV FKESIENGTD PKKYVEDKGM VQLSDVSVLG PMVTKVVDDN PQSVEDFKNG KDRAIGFLVG QIMKQTRGKA NPKVVNQLLN KELQSR
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