| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1471 |
|---|
| Symbol | |
|---|
| ID | 4439331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1460826 |
|---|
| End bp | 1461965 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639673300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_815266 |
|---|
| Protein GI | 116630094 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 152 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC CAAAACATCA CGCTTTGCTA TCAGCTTCTA GTGCCAACCG TTGGTTAAGT
GCTCCGCCAC TCCCACGATT GGAACAATAT TTTCCGCACT CCACTTCCAA TGCTGCCGCC
GAAGGAACGG CTGCTCATGC TTTGGGAGAG TATAAGATTC ATCGACTGCT TGGTGATAAG
TTCAAACGCC CATCTTCTGA CTACCAATCT GATGAGATGG AGAGTCTGAC TGACGATTAT
GCCAGCTACG TCATGGAACA ATACGAACAA GCAAAAGAAT ACGCACCTGA CGCCACCATC
CGCGTAGAAC AGAAACTGGA CTTCTCTCAA TATGTTCCTG AAGGCTTCGG CACTGGCGAC
TGTGTGATTG CTTCTGACCA CCTACTTCAT ATTATCGACT TCAAATATGG GAAAGGTGTC
CGAGTGGAAG CCAAGAATAA TCCACAGATG AAGCTCTACG CCATTGGTGC CCTAGAAATG
TTCGGTAACT TGTACAACGT TGACGAAATC AAAATTATAA TTTTTCAACC TCGCATGGCC
AATATTAGTA CTTGGAGGAT TGATGCCAAG CAGCTCATGC ACTGGGCTAA CACCGAACTC
AAGCAAAAGG CCGAATTAGC TTTTGCTGGC AAAGGTACTA TTCGTTATGG TCCCTGGTGT
CAATTCTCTG CTTGCAACGC AGTGCTACGT GCCCGATATG ACTACCACCA TAAACTTACT
CGTTTTCAGC TTTGCTCTCC CAATCTGTTA ACGGACAAAG AAGTTACTGA GGTTCTGGAA
CATATCGATG ACTTAAACCG CTGGGCTCAC GAAGTTAAAG ATTACGCTGC TGATTTAGCC
ATCAACCATG GCAAGCAGTG GCCAGGTTAC AAAATCGTCG AAGGTCGATC CGTCCGACAC
TATAAGAATG AAGCAGCTGT AGCAAAAATT GCTGAAGCTA ATGGCTATCA CAATATTTAC
CAAAAGAAGC TACTGCCAAT TACAAAGTTA GAAAAACAGC TCGGCAAGAA GAAATTTACC
GAACTGTTCA GTCAGGAAAT TGTTAAGCCC GCGGGTAAAC CAACCCTAGT ACCAAATTCT
GATCGGCGCC AGGGTATTGG TAAATCAAAC CCCAAGGATG AATTTAAGGA GGAAAAATAA
|
|---|
| Protein sequence | MSSPKHHALL SASSANRWLS APPLPRLEQY FPHSTSNAAA EGTAAHALGE YKIHRLLGDK
FKRPSSDYQS DEMESLTDDY ASYVMEQYEQ AKEYAPDATI RVEQKLDFSQ YVPEGFGTGD
CVIASDHLLH IIDFKYGKGV RVEAKNNPQM KLYAIGALEM FGNLYNVDEI KIIIFQPRMA
NISTWRIDAK QLMHWANTEL KQKAELAFAG KGTIRYGPWC QFSACNAVLR ARYDYHHKLT
RFQLCSPNLL TDKEVTEVLE HIDDLNRWAH EVKDYAADLA INHGKQWPGY KIVEGRSVRH
YKNEAAVAKI AEANGYHNIY QKKLLPITKL EKQLGKKKFT ELFSQEIVKP AGKPTLVPNS
DRRQGIGKSN PKDEFKEEK
|
|---|
| |