| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1441 |
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| Symbol | trmB |
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| ID | 4439352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1429516 |
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| End bp | 1430169 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673271 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_815238 |
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| Protein GI | 116630066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000388328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTAA GAAATAAGCC TTGGGCTCAA AAATTAGTAG TTGAACATCC AGAAGCTATT
TTGAATGAGC CAGATCCGGA AAAGAAAATT AACTGGGAAG AGAGATTTGA TGACTTTTCT
AAGCCTTTGG CAATTGAAAT TGGCTCAGGC AAGGGACAAT TTATCACTAC TTTAGCTAAG
AAACATCCTG AAATGAATTT TATTGGCGTA GAGCTTCAAA CCACAGCTGC AGGGATGATT
TTGAGAACTA AGTTAGAAGA AAAGATCGAT AATTTACAGT TAATGTGTGC TGATGCAGCT
AATATAGCAA TGTATTTACC TGAAAATAGT GTAGATGTTG TTTACTTGAA CTTTTCTGAT
CCATGGCCAA AGACGCGTCA TGAGAAACGG AGATTGACAT ATAAGAGTTT TTTAGACAAG
TATCGCCAGA TATTAAAGCC AGAAGGGCAT TTAGAATTTA AGACAGATAA TCAAGGACTA
TTTGAGTATA GTTTGGTAAG TCTTAACAAT TATGGGATGA AATTTGACTA TGTTAGTTTA
GATTTACATC ATGCAGAAAA TGAAATTCTC GAAAGAAATG TTGAGACTGA ATATGAACAT
AAATTTGCAG CAAAAGGTAA TCCGATTTAC TGTCTACATG CACATTTTGA ATAG
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| Protein sequence | MRLRNKPWAQ KLVVEHPEAI LNEPDPEKKI NWEERFDDFS KPLAIEIGSG KGQFITTLAK
KHPEMNFIGV ELQTTAAGMI LRTKLEEKID NLQLMCADAA NIAMYLPENS VDVVYLNFSD
PWPKTRHEKR RLTYKSFLDK YRQILKPEGH LEFKTDNQGL FEYSLVSLNN YGMKFDYVSL
DLHHAENEIL ERNVETEYEH KFAAKGNPIY CLHAHFE
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