| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1435 |
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| Symbol | |
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| ID | 4439346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1426187 |
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| End bp | 1426921 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 639673267 |
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| Product | transcriptional regulator |
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| Protein accession | YP_815234 |
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| Protein GI | 116630062 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.851115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAATGA TGACAAAAGT TGAAGAGATA GTAAAGATAA TCAGAGAAAG AATTAGAAAT
GAAACATATA CCAGCCGTCA GCGACTGCCT TCTGAATATC AATTAGCGCA AGAATTTGAT
GTTTCACGTT TGACGATTAG AAAAGCAATT AGTCGTTTGA TAAACGCCAA AATATTAGTA
AAAGATCCGG GTAAAGGCAC ATATGTAATG TTAGGTGCTG AAAGAAATTC AAAAATTGAA
TCTGGTAGAG GAGGATTGCA AAGTTTTACT GAAGTTGCTA AAGAACATGG AAAAACGGTG
CACACTAAAG TATTAAAATT CGCACCTATT AGAAATCCGA GTAGAAAAAT TAGTGAAATA
TTGGCACTAG ACGATAGATT AGATAAAAAG GTTTTTGAGT TAAAAAGAAT ACGTTATTGG
GATAATGACC CGATGACTCT CGAAAAAATT CTTATTTGTG GTGAATATAT AAAAAATAAG
ACATTAGCTG ATTTTGAACA ATCTTTATTT AAAATCTTAA ATGAAAATAT CGAAATTGGT
TATGCACATC AAGAGATTGA AGCAATTATG GTTACTGATG AAATTTCTAA ATATTTGAAC
ATTAAGGGAC AACAGCCAAT ATTTAAAGTT AAGACTATAA CCTATACGCC AGATGCAATC
CCTATTTTCT TTGATACATC ATTTTATCGA GCTGATAAAT ATTCATTCAA GTCAACACTA
ACTAGGTTGA GATAG
|
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| Protein sequence | MKMMTKVEEI VKIIRERIRN ETYTSRQRLP SEYQLAQEFD VSRLTIRKAI SRLINAKILV
KDPGKGTYVM LGAERNSKIE SGRGGLQSFT EVAKEHGKTV HTKVLKFAPI RNPSRKISEI
LALDDRLDKK VFELKRIRYW DNDPMTLEKI LICGEYIKNK TLADFEQSLF KILNENIEIG
YAHQEIEAIM VTDEISKYLN IKGQQPIFKV KTITYTPDAI PIFFDTSFYR ADKYSFKSTL
TRLR
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