Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1411 |
Symbol | |
ID | 4439392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1404253 |
End bp | 1405206 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639673244 |
Product | ABC-type transport system, ATPase component |
Protein accession | YP_815211 |
Protein GI | 116630039 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000715833 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 3.14e-28 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTACTTA AAGTAAGAAA CTTAAGCAAA AGTTTTCAAA ATGGAACAAG GGCAATTGAA GATTTATCAT TTGATATTCC CGCTGGAAAA ATAACTGCTT TTTTAGGATT TAATGGAGCG GGAAAAACGA CTAGTTTAAA AATAATTTTG AACTTATTGC TTCCTGATGA AGGAAAAATA TATTTTGAAA ATAAATTGCT AAAAAATGAT TTTACACCTT TATTAAAACA AACCGGGGTA GTTTTAGAGA GTGCACGTAA TATGTTTTAT GCTTTGACAC CAATGGAAAA TTTTATCTAT TGGGGAGCTC AACGTGGACT AAATAAAAAA GTAGCACAGA AAAATGGCTT AGAACTATTA GAGAAATTTG ATCTCTTGTC TAAAAAGGAT ACGGTTATTT TTGAATTAAG TCGAGGGATG CAGCAGATTA TTGCTATTTG CTGTGCGTTA ATCTCTAAGC CTAAATTTTT GGTTTTAGAT GAACCGACTC TTGGTTTAGA TATTGAAGCG GTAGAAACTG TGGAACGAAT ATTAAAAACA TTAGCTTCTG AAGGAGTTGC AATTTTATTA ACTACGCATG AATTGGCATT TGCTCAAAGA ATTGCAGATC AGATTCTCCT AATAAAGAAA GGACGGTTAA TTTATAGCGG TAGTAAAGCT GATTGTTTAG ATAAATTCAA TCAAGAAAAA TTTATCACAG TTCAATTTTC ACAAGCTCTT TCAAACAATC AACGAGCAGT TTTAGAAAGT ATTGCTAAGA TTATTTCGAT TAATAATACT ACTTATCAAT TGGTTTTATC TAATCGAAAA AATTTATCGC ATTTATTGAA ATTTTTAACT CAATTTAAAT TGATGGATCT AAAAACTAAA AATAAAGGTT TAAATGAAGT GGTTGATTTT TATATGAAAG GAAAGAATGA AGATGGTAGC ATTAAAAGCG GAATTTCAGC GTGA
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Protein sequence | MLLKVRNLSK SFQNGTRAIE DLSFDIPAGK ITAFLGFNGA GKTTSLKIIL NLLLPDEGKI YFENKLLKND FTPLLKQTGV VLESARNMFY ALTPMENFIY WGAQRGLNKK VAQKNGLELL EKFDLLSKKD TVIFELSRGM QQIIAICCAL ISKPKFLVLD EPTLGLDIEA VETVERILKT LASEGVAILL TTHELAFAQR IADQILLIKK GRLIYSGSKA DCLDKFNQEK FITVQFSQAL SNNQRAVLES IAKIISINNT TYQLVLSNRK NLSHLLKFLT QFKLMDLKTK NKGLNEVVDF YMKGKNEDGS IKSGISA
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