| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1407 |
|---|
| Symbol | rplT |
|---|
| ID | 4439388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1402170 |
|---|
| End bp | 1402526 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639673240 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_815207 |
|---|
| Protein GI | 116630035 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1.94552e-17 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 1.09394e-28 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAA CTAAAGGTGG AACCGTAACA CGCGCTCGTC GTAAGAAGAT CATGAAGTTA
GCCAAGGGTT ACCGTGGCTC AAAACACTTA CAATTTAAAG CTGCAAGTAC TCAAGTATTT
GTTTCTCGTA AATATGCTTT CCGTGACCGT AAGAAGCGTA AGAGTGAATT CAGAAAATTA
TGGATTGCTC GTATCAACGC TGCTGCAAGA CAAAATGGTC TTTCATACTC TAAGTTAATG
CACGGCTTAA AGGTAGCTGG TATTGACATG AACCGTAAGA TGTTAGCTGA TATTGCTTAC
AACGACGAAA AGGCTTTTGC TGATTTAGCA GATGCTGCTA AGAAAGCTTT GAACTAA
|
|---|
| Protein sequence | MPRTKGGTVT RARRKKIMKL AKGYRGSKHL QFKAASTQVF VSRKYAFRDR KKRKSEFRKL
WIARINAAAR QNGLSYSKLM HGLKVAGIDM NRKMLADIAY NDEKAFADLA DAAKKALN
|
|---|
| |