Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1361 |
Symbol | |
ID | 4439412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1358411 |
End bp | 1358677 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673194 |
Product | phosphocarrier protein HPr |
Protein accession | YP_815161 |
Protein GI | 116629989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.228078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00001957 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAAAAAC GCGAATTTCA TATTGTTGCT GAAACTGGTA TTCATGCACG TCCAGCTACT TTGTTGGTAC AAGCTGCATC TAAGTTTAAC TCAGATATTA ACTTGGAATA CAATGGTAAA TCAGTAAACT TGAAGTCAAT CATGGGTGTT ATGTCTTTAG GTGTTGGCCA AGGTGCAGAC GTAACTATTA CTGCTGATGG TGACGATGCT AAAGAAGCAA TCGAAGCTAT TGCTGACACT ATGAAAAAGG AAGGTTTAGC TGAATAA
|
Protein sequence | MEKREFHIVA ETGIHARPAT LLVQAASKFN SDINLEYNGK SVNLKSIMGV MSLGVGQGAD VTITADGDDA KEAIEAIADT MKKEGLAE
|
| |